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Commits on Jan 19, 2017

• genbank.pm: Added sorted print of feature qualifiers

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Commits on Jul 8, 2016

• Minor change at print for Bio::Restriction::IO::prototype

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Commits on Jul 7, 2016

• MeSH: Moved the cgi webpage check from '_cgi_url' into '_init'.

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• MeSH: Now '_cgi_url()' function retrieves current-year webpage

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• file_classification: Deleted some removed files from the list

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• DEPENDENCIES: Deleted some removed modules from descriptions

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• Removed Mitoprot support, a service that is not working anymore

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• Merge branch 'master' of https://github.com/bioperl/bioperl-live

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• Mitoprot.t: Untabified test file and changed server connection error.

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• Fixed total number of tests for RootIO.t

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Commits on Jul 6, 2016

• Removed obsolete files from Manifest

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• hmmer3: Made one debug print message consistent with the other 2

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Commits on Jun 24, 2016

• Merge pull request bioperl#159 from jkeenan/sirna-left-brace

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Commits on Dec 21, 2015

• Merge branch 'master' of https://github.com/bioperl/bioperl-live

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• Updated INSTALL.WIN with the recent changes made in bioperl.github.io

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Commits on Dec 14, 2015

• phd: Fixed new "unescaped left brace in regex" warning from Perl 5.22

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• Build.PL: Removed duplicated dependency 'HTML::TableExtract'

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Commits on Dec 13, 2015

• Restriction::IO.t: REBASE ftp database is not responding properly,

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• hmmer.t: Added test case for the recent \Q\E fix for HMMer3 parsing

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• embl & genbank: Standarized their qualifier treatment (removed use of $_,

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• hmmer3: Added use of \Q\E on match of alignment lines to avoid errors

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Commits on Mar 19, 2015

• Merge pull request bioperl#106 from lairdm/master

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Commits on Jan 2, 2015

• Moved optimized \n and \r removal subroutine from Bio::DB::Fasta

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Commits on Dec 24, 2014

• Merge pull request bioperl#96 from rocky/Inline-C-Fasta

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Commits on Dec 20, 2014

• Fixed a typo from my previous commit

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Commits on Dec 19, 2014

• nexml.t: Added a missing XML::Twig requirement.

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• Sopma.t: Added -requires_networking requirement up front (in case

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• Inactivated tests for GOR4.t, HNN.t and Sopma.t, since their server

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• Sopma.pm: Fixed a bug where the server is not responding but the

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Commits on Nov 17, 2014

• Fixed small typo

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• Updated Changes and included myself in AUTHORS after Chris suggestion

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Commits on Nov 16, 2014

• CodonTable.pm: Fix for issue bioperl#90. Added new codon tables 24 & 25 and

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• Coveralls report finally worked but only some jobs can finish on time,

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Commits on Nov 13, 2014

• Last try failed probably because I did not specify one of

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• In the last try 3 builds almost finished. This last tweak removes

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