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v2.12.0

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@epi2melabs-bot epi2melabs-bot released this 13 Dec 17:00
· 2 commits to master since this release

Added

  • bracken_threshold parameter to adjust bracken minimum read threshold, default 10.

Fixed

  • Publish AMR results to the output directory when real time is disabled.
  • Abricate process failure is now correctly caught by the workflow.

Changed

  • Reconcile workflow with wf-template v5.3.3
  • Update wf-metagenomics image for improved fastcat/bamstats.