An orchestration platform for the development, production, and observation of data assets.

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

This is a toy example of a data web application built using a modern data tech stack

Tag manager and captioner for image datasets

An algorithmic bluesky feed that works based on my feed

A collection of prompts, system prompts and LLM instructions

Bioinformatics one liners from Ming Tang

Model Context Protocol Servers

Genome modeling and design across all domains of life

Read specialized NGS formats as data frames in R, Python, and more.

Create, manage, and run Jupyter notebooks with their dependencies

A generative AI extension for JupyterLab

💨 Fast, Async-ready, Openapi, type hints based framework for building APIs

Install and run applications packaged with conda in isolated environments

Autonomous coding agent right in your IDE, capable of creating/editing files, executing commands, using the browser, and more with your permission every step of the way.

A secure authentication module to manage user access in a Streamlit application.

FastAPI framework, high performance, easy to learn, fast to code, ready for production

Langflow is a powerful tool for building and deploying AI-powered agents and workflows.

Implementation of the Cypher language for searching NetworkX graphs

Package management made easy

A project for libraries and automated tools that manage and manipulate conda recipe files.

rattler-build is a universal package builder for Windows, macOS and Linux

📦 Pack and unpack conda environments created with pixi

Build and share delightful machine learning apps, all in Python. 🌟 Star to support our work!

Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.

LLM Frontend for Power Users.

A tool to map bisulfite converted sequence reads and determine cytosine methylation states