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Showing results

A comprehensive library for computational molecular biology

Python 709 103 Updated Dec 24, 2024

Infinite Photorealistic Worlds using Procedural Generation

Python 5,971 494 Updated Dec 24, 2024

Blender Addon: Differential Growth

Python 809 28 Updated Feb 25, 2022

Ultra-fast preprocessing and quality control for long-read sequencing data

C++ 90 4 Updated Dec 24, 2024

Python tool for converting files and office documents to Markdown.

Python 29,669 1,177 Updated Dec 21, 2024

A modular nextflow construct for parallelizing simple FASTQ processing tasks with map/reduce

Nextflow 1 Updated Dec 12, 2024

POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction

Nextflow 10 2 Updated Dec 3, 2024

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

Python 250 31 Updated Dec 12, 2024

Official repository for the Boltz-1 biomolecular interaction model

Python 1,466 170 Updated Dec 31, 2024

Aggregate results from bioinformatics analyses across many samples into a single report.

JavaScript 1,244 606 Updated Dec 29, 2024

AlphaFold 3 inference pipeline.

Python 5,716 679 Updated Dec 20, 2024

quality filtering tool for long reads

C++ 303 28 Updated Aug 12, 2023

A Nextflow pipeline for generating consensus sequences from Nanopore reads tagged with UMIs

R 6 3 Updated Sep 27, 2024

A 'ggplot2' Extension for Consistent Axis Alignment

R 214 8 Updated Jan 1, 2025

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

JavaScript 12,831 44,732 Updated Dec 30, 2024

Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/

Python 276 17 Updated Dec 31, 2024

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads

C++ 207 34 Updated Dec 29, 2023
Shell 5 1 Updated Jul 19, 2023

Cagebreak: A Wayland Tiling Compositor Inspired by Ratpoison

C 294 19 Updated Dec 31, 2024

Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics

Nextflow 21 6 Updated Dec 24, 2024

User friendly and accurate binder design pipeline

Python 381 71 Updated Dec 31, 2024

A list of interesting genome browser and genome visualization programs

TypeScript 880 112 Updated Dec 20, 2024

Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans

Python 4,761 1,671 Updated Dec 23, 2024

DuckDB is an analytical in-process SQL database management system

C++ 25,367 1,994 Updated Dec 30, 2024

Run macOS VM in a Docker! Run near native OSX-KVM in Docker! X11 Forwarding! CI/CD for OS X Security Research! Docker mac Containers.

Shell 49,164 2,747 Updated Nov 18, 2024

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow 287 735 Updated Dec 31, 2024

A curated collection of Nextflow implementation patterns

Nextflow 336 70 Updated Nov 21, 2023

A curated list of nextflow based pipelines

576 89 Updated Oct 27, 2022

Open-source usearch

C++ 105 13 Updated Jun 16, 2024
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