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markitdown Public
Forked from microsoft/markitdownPython tool for converting files and office documents to Markdown.
Python MIT License UpdatedDec 21, 2024 -
alphafold3 Public
Forked from google-deepmind/alphafold3AlphaFold 3 inference pipeline.
Python Other UpdatedDec 20, 2024 -
openfold Public
Forked from aqlaboratory/openfoldTrainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Python Apache License 2.0 UpdatedDec 4, 2024 -
chai-lab Public
Forked from chaidiscovery/chai-labChai-1, SOTA model for biomolecular structure prediction
Python Apache License 2.0 UpdatedDec 3, 2024 -
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ibm3202 Public
Forked from pb3lab/ibm3202Google Colab Tutorials for IBM3202
Jupyter Notebook MIT License UpdatedNov 6, 2024 -
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LLMs-from-scratch Public
Forked from rasbt/LLMs-from-scratchImplementing a ChatGPT-like LLM in PyTorch from scratch, step by step
Jupyter Notebook Other UpdatedOct 8, 2024 -
folding_tools Public
Forked from biolists/folding_toolsA collection of *fold* tools
MIT License UpdatedSep 19, 2024 -
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making-it-rain Public
Forked from pablo-arantes/making-it-rainCloud-based molecular simulations for everyone
Rich Text Format MIT License UpdatedApr 3, 2024 -
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preparation Public
This scripts performs preparation and equilibiration of open-state T4-lysozyme for MD simulation
Shell UpdatedDec 20, 2023 -
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julia-bootcamp-2022 Public
Forked from cpfiffer/julia-bootcamp-2022Jupyter Notebook MIT License UpdatedAug 22, 2023 -
MD_without_molecules Public
Forked from dgattiwsu/MD_without_moleculesMolecular dynamics without molecules: searching the conformational space of proteins with generative neural networks
Jupyter Notebook Apache License 2.0 UpdatedJun 13, 2022 -
paper_boltzmann_generators Public
Forked from noegroup/paper_boltzmann_generatorsJupyter Notebook Creative Commons Attribution 4.0 International UpdatedDec 6, 2021 -
espaloma Public
Forked from choderalab/espalomaExtensible Surrogate Potential of Ab initio Learned and Optimized by Message-passing Algorithm 🍹https://arxiv.org/abs/2010.01196
Python MIT License UpdatedNov 17, 2021 -
alphafold Public
Forked from google-deepmind/alphafoldOpen source code for AlphaFold.
Python Apache License 2.0 UpdatedNov 16, 2021 -
EnsRef_Exdata Public
''An Ensemble Reweighting Method for Combining the Information of Experiments and Simulations'' Yu Yamamori, Kentaro Tomii Chemical Physics Letters 779, 16, 138821, (2021)
C UpdatedJul 7, 2021 -
mdtraj Public
Forked from mdtraj/mdtrajAn open library for the analysis of molecular dynamics trajectories
C GNU Lesser General Public License v2.1 UpdatedJun 22, 2021 -
mldl-md-dynamics Public
Forked from sha256feng/mldl-md-dynamicsA repository of update in molecular dynamics field by recent progress in machine learning and deep learning.
UpdatedFeb 28, 2021