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CAS-MPG Partner Institute for Computational Biology
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Alphafold3_google Public
Forked from google-deepmind/alphafold3AlphaFold 3 inference pipeline.
Python Other UpdatedNov 11, 2024 -
AlphaFold3_2024 Public
Forked from Ligo-Biosciences/AlphaFold3Open source implementation of AlphaFold3
Python Apache License 2.0 UpdatedOct 7, 2024 -
openfold Public
Forked from aqlaboratory/openfoldTrainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Python Apache License 2.0 UpdatedAug 29, 2024 -
RFM Public
Forked from tyuxie/RFMThe official codebase for Reflected Flow Matching (ICML 2024)
Python MIT License UpdatedJun 19, 2024 -
code_for_lecture Public
Forked from schoolbag123/code_for_lecture个人对于课程代码的实现都摆在这里
Jupyter Notebook UpdatedJun 18, 2024 -
LucaOne Public
Forked from LucaOne/LucaOneThe LucaOne’s model code.
Python Apache License 2.0 UpdatedJun 11, 2024 -
alphafold3-pytorch Public
Forked from lucidrains/alphafold3-pytorchImplementation of Alphafold 3 in Pytorch
Python MIT License UpdatedJun 9, 2024 -
cfm-scheduler Public
Forked from ccr-cheng/cfm-schedulerImplement different schedulers for flow matching models
Python MIT License UpdatedMay 29, 2024 -
cs231n.github.io Public
Forked from cs231n/cs231n.github.ioPublic facing notes page
Jupyter Notebook MIT License UpdatedMay 16, 2024 -
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single_cell_pb Public
Forked from Eliorkalfon/single_cell_pbDeep learning models for the Kaggle's Open Problems – Single-Cell Perturbations competition
Python UpdatedApr 27, 2024 -
scGCO Public
Forked from WangPeng-Lab/scGCOSingle-cell Graph Cuts Optimization
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PythonDataScienceHandbook Public
Forked from jakevdp/PythonDataScienceHandbookPython Data Science Handbook: full text in Jupyter Notebooks
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single-cell-transformer-papers Public
Forked from theislab/single-cell-transformer-papersOther UpdatedMar 2, 2024 -
ChatCell Public
Forked from zjunlp/ChatCellChatCell: Facilitating Single-Cell Analysis with Natural Language
Python Other UpdatedFeb 21, 2024 -
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scEval Public
Forked from HelloWorldLTY/scEvalCodes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.
Jupyter Notebook UpdatedDec 5, 2023 -
nlp-tutorial Public
Forked from graykode/nlp-tutorialNatural Language Processing Tutorial for Deep Learning Researchers
Jupyter Notebook MIT License UpdatedNov 28, 2023 -
ImbalancedLearningForSingleCellFoundationModels Public
Forked from SabbaghCodes/ImbalancedLearningForSingleCellFoundationModelsJupyter Notebook UpdatedOct 27, 2023 -
sc-foundation-eval Public
Forked from clinicalml/sc-foundation-evalCode for evaluating single cell foundation models scBERT and scGPT
Jupyter Notebook UpdatedOct 24, 2023 -
clinicalml-scBERT-NMI Public
Forked from clinicalml/clinicalml-scBERT-NMIanalysis code to reproduce results in NMI submission
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedSep 13, 2023 -
LLM_xAI_Biomarkers Public
Forked from Jotels/LLM_xAI_BiomarkersJupyter Notebook UpdatedAug 21, 2023 -
awesome-deep-learning-single-cell-papers Public
Forked from OmicsML/awesome-deep-learning-single-cell-papersApache License 2.0 UpdatedAug 4, 2023 -
dance Public
Forked from OmicsML/danceDANCE: A Deep Learning Library and Benchmark Platform for Single-Cell Analysis
Python BSD 2-Clause "Simplified" License UpdatedJul 29, 2023 -
gpt-pytorch Public
Forked from lyeoni/gpt-pytorchPyTorch Implementation of OpenAI GPT
Python MIT License UpdatedJun 28, 2023 -
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single-cell-pseudotime Public
Forked from agitter/single-cell-pseudotimeAn overview of algorithms for estimating pseudotime in single-cell RNA-seq data
Creative Commons Attribution 4.0 International UpdatedJun 9, 2023 -
graph-based-deep-learning-literature Public
Forked from naganandy/graph-based-deep-learning-literaturelinks to conference publications in graph-based deep learning
Jupyter Notebook MIT License UpdatedJun 9, 2023 -
awesome-pretrain-on-molecules Public
Forked from junxia97/awesome-pretrain-on-moleculesA curated list of resources for molecular pre-trained models or chemical language models
UpdatedJun 9, 2023