add genomes to DESCRIPTION

gagneurlab · Jan 13, 2025 · 19affb3 · 19affb3
1 parent 6d7143b
commit 19affb3
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Showing 2 changed files with 5 additions and 1 deletion.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -81,6 +81,10 @@ Imports:
     VGAM
 Suggests:
     magick,
+    BSgenome.Hsapiens.UCSC.hg38,
+    BSgenome.Hsapiens.NCBI.GRCh38,
+    BSgenome.Hsapiens.1000genomes.hs37d5,
+    BSgenome.Hsapiens.UCSC.hg19,
     BiocStyle,
     knitr,
     rmarkdown,

diff --git a/tests/testthat/test_updateSeqlevelsStyle.R b/tests/testthat/test_updateSeqlevelsStyle.R
@@ -17,7 +17,7 @@ test_that("hg38, UCSC to NCBI", {
 })
 
 test_that("hg38, NCBI to UCSC", {
-  BiocManager::install("BSgenome.Hsapiens.NCBI.GRCh38")
+  #BiocManager::install("BSgenome.Hsapiens.NCBI.GRCh38")
   genome <- getBSgenome("GRCh38")
   bsgenome <- genome