12 Pull requests merged by 8 people

• Update Python dependencies

  #19366 merged Jan 13, 2025

• [24.2] Outputs filter linter fixes

  #19208 merged Jan 13, 2025

• [24.2] Backport fix from #19396

  #19399 merged Jan 13, 2025

• [24.2] Update visualizations package versions

  #19232 merged Jan 13, 2025

• Use id entity attribute when setting exampleOfWork property

  #19396 merged Jan 13, 2025

• SQLAlchemy 2.0 follow-up

  #19388 merged Jan 10, 2025

• [24.1] Record implicitly converted dataset as input dataset

  #19301 merged Jan 10, 2025

• [24.2] Fix to only show ChatGXY when available.

  #19389 merged Jan 9, 2025

• [24.2] Fix to not display upload when creating collections from existing datasets.

  #19373 merged Jan 9, 2025

• [24.2] Fixes for console logging.

  #19381 merged Jan 9, 2025

• [24.2] Fix for empty string in regex validator message.

  #19387 merged Jan 9, 2025

• Remove apptainer-version pin

  #19380 merged Jan 8, 2025

12 Pull requests opened by 8 people

• Documentation around highlighting PRs for release notes.

  #19390 opened Jan 9, 2025

• Merge latest 24.2 into dev.

  #19392 opened Jan 9, 2025

• [24.2] Display upload help highlight only once and include Rule-based upload info

  #19393 opened Jan 9, 2025

• Better handling of public pages and workflows authored by deleted users

  #19394 opened Jan 10, 2025

• Alternative `format_source` fix

  #19395 opened Jan 10, 2025

• Refactor of User-Reported Dataset Error Emails

  #19401 opened Jan 13, 2025

• Display email activation help only if user activation is enabled

  #19402 opened Jan 13, 2025

• Change galaxy system user uid for K8s image

  #19403 opened Jan 13, 2025

• [24.2] Show message for mixed extensions in collection creator

  #19404 opened Jan 13, 2025

• Gulp build improvements, update.

  #19405 opened Jan 14, 2025

• Set safe default extraction filter for tar archives

  #19406 opened Jan 14, 2025

• Remove transaction helper

  #19407 opened Jan 14, 2025

10 Issues closed by 3 people

• purge user to permanently delete all associated objects

  #930 closed Jan 15, 2025

• Upgrading database on 20.05 fails with: language "plpgsql" does not exist

  #10218 closed Jan 15, 2025

• Add job_id column to Dataset table.

  #9727 closed Jan 15, 2025

• uwsgi_schema.yml overwritten when running local unit test

  #13482 closed Jan 15, 2025

• SQLAlchemy 2.0 compatibility

  #12541 closed Jan 15, 2025

• Some thoughts on adding and updating dependencies

  #11618 closed Jan 15, 2025

• Detached session error reoccurring

  #16967 closed Jan 15, 2025

• Deleted users can reset their password

  #18195 closed Jan 15, 2025

• Misunderstanding Location for tool_conf.xml

  #19397 closed Jan 11, 2025

• [24.2] `RegexParameterValidatorModel.regex_validation` fails for bcftools annotate

  #19386 closed Jan 10, 2025

4 Issues opened by 4 people

• Scan for presence of a header in Grouping1 to improve the UX

  #19408 opened Jan 15, 2025

• do not explain activation to users when it is not enabled on the instance

  #19400 opened Jan 13, 2025

• Bugs in Control Panel Element

  #19398 opened Jan 11, 2025

• change `file_source_templates_config_file` to `file_source_templates_config_dir`

  #19391 opened Jan 9, 2025

24 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• [24.1] Fix quota usage with user object stores

  #19323 commented on Jan 14, 2025 • 5 new comments

• Migrate WorkflowEditor to TypeScript

  #19246 commented on Jan 14, 2025 • 2 new comments

• 24.2 release notes [draft]

  #19223 commented on Jan 13, 2025 • 2 new comments

• Let file sources choose a path for uploaded files

  #19154 commented on Jan 14, 2025 • 1 new comment

• clarify that extra_scopes is sometimes non-optional

  #19385 commented on Jan 13, 2025 • 0 new comments

• Empower Users to Build More Kinds of Collections, More Intelligently

  #19377 commented on Jan 9, 2025 • 0 new comments

• [24.1] Determine expression tool output extension when input terminal

  #19364 commented on Jan 10, 2025 • 0 new comments

• Added a Passwort Strength Component for User Registration

  #19355 commented on Jan 14, 2025 • 0 new comments

• [WIP] Implement Sample Sheets

  #19305 commented on Jan 9, 2025 • 0 new comments

• [WIP] Workflow Run Form Enhancements

  #19294 commented on Jan 14, 2025 • 0 new comments

• Revises Markdown Pages and Reports

  #19226 commented on Jan 15, 2025 • 0 new comments

• Support secrets in tool requirements

  #19084 commented on Jan 15, 2025 • 0 new comments

• Reduce tool form building frequency

  #18969 commented on Jan 13, 2025 • 0 new comments

• Add author and tools details in RO-Crate

  #18820 commented on Jan 15, 2025 • 0 new comments

• Strip galaxy filename annotation on upload

  #18561 commented on Jan 9, 2025 • 0 new comments

• Implement a subset of the Common Workflow Language

  #12909 commented on Jan 15, 2025 • 0 new comments

• Allow purging users, jobs completely from the DB

  #13738 commented on Jan 15, 2025 • 0 new comments

• Publication of Galaxy Release v 24.2

  #19129 commented on Jan 15, 2025 • 0 new comments

• Data Library's "Import from User Directory" interface's display is very slow for full directories

  #19209 commented on Jan 15, 2025 • 0 new comments

• Collection Creator Usability: Warn on mixed datatype collections

  #19277 commented on Jan 14, 2025 • 0 new comments

• ubuntu 20.04 cannot install galaxy through "sh run.sh"

  #19375 commented on Jan 10, 2025 • 0 new comments

• Insert button changes changes shape on click

  #19361 commented on Jan 9, 2025 • 0 new comments

• NORA visualisation failing on 24.1

  #19205 commented on Jan 9, 2025 • 0 new comments

• add possibility to annotate a tool with an icon

  #14976 commented on Jan 9, 2025 • 0 new comments