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KEGGRESTpy Public
A Python package for interacting with the KEGG REST API.
Python MIT License UpdatedNov 11, 2024 -
scGSVA Public
scGSVA: Perform GSVA for single cell RNA seq
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richR Public
Function Enrichment analysis and Network construction
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o2plsda Public
Omics data integration with o2plsda
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fctutils Public
The fctutils package provides a collection of utility functions for manipulating and analyzing factor vectors in R.
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microbial Public
Do microbiome analysis with dada2 and phyloseq object
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eoffice Public
Export and import graphics and tables to MicroSoft office
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hello-algo Public
Forked from krahets/hello-algo《Hello 算法》：动画图解、一键运行的数据结构与算法教程。支持 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 代码。简体版和繁体版同步更新，English version ongoing
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OnPLS Public
Forked from tomlof/OnPLSOnPLS: Orthogonal Projections to Latent Structures in Multiblock and Path Model Data Analysis
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 15, 2024 -
rcellmarker Public
Identify cell type based on cell markers for single cell squencing
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Book4_Power-of-Matrix Public
Forked from Visualize-ML/Book4_Power-of-MatrixBook_4_《矩阵力量》 | 鸢尾花书：从加减乘除到机器学习；上架！
Python UpdatedJun 29, 2024 -
scellplot Public
single cell and spatial transcriptomics plot
R GNU General Public License v3.0 UpdatedApr 25, 2024 -
d2l-zh- Public
Forked from d2l-ai/d2l-zh《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。
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drug2cell Public
Forked from Teichlab/drug2cellGene group activity utility functions for Scanpy
Jupyter Notebook Other UpdatedNov 15, 2023 -
visium_heart Public
Forked from saezlab/visium_heartSpatial transcriptomics of heart tissue
Jupyter Notebook GNU General Public License v3.0 UpdatedOct 7, 2023 -
tidygroup Public
Do analysis with group information
GNU General Public License v3.0 UpdatedOct 2, 2023 -
C9_ALS_FTD_single_nuclei_transcriptome_epigenome Public
Forked from hoholee/C9_ALS_FTD_single_nuclei_transcriptome_epigenomeCode repository for analysis in "Divergent impacts of C9orf72 repeat expansion on neurons and glia in ALS and FTD"
R MIT License UpdatedSep 18, 2023 -
annotated_deep_learning_paper_implementations Public
Forked from labmlai/annotated_deep_learning_paper_implementations🧑🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gan…
Jupyter Notebook MIT License UpdatedJul 24, 2023 -
bioAnno Public
Build Annotation package by using information from KEGG, NCBI, Ensembl
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KrakenTools Public
Forked from jenniferlu717/KrakenToolsKrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
Python GNU General Public License v3.0 UpdatedMar 21, 2023 -
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ChatGPT Public
Forked from lencx/ChatGPT🔮 ChatGPT Desktop Application (Mac, Windows and Linux)
Rust Apache License 2.0 UpdatedFeb 7, 2023 -
Machine-Learning-Collection Public
Forked from aladdinpersson/Machine-Learning-CollectionA resource for learning about Machine learning & Deep Learning
Python MIT License UpdatedSep 29, 2022 -
ComputationalGenomicswithR Public
Forked from compgenomr/bookComputational Genomics with R
TeX UpdatedSep 21, 2022