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@hubmapconsortium

HuBMAP Consortium

This is the GitHub organization for repos related to the work of the HuBMAP Consortium.

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  1. entity-api entity-api Public

    A set of web service calls to return information about HuBMAP entities

    Python 3 1

  2. gateway gateway Public

    Custom gateway service with auth check for APIs and file assets not hosted with AWS API Gateway

    Python

  3. search-api search-api Public

    HuBMAP search service and associated pieces to create an index

    Python 2 2

  4. portal-ui portal-ui Public

    HuBMAP Data Portal front end

    TypeScript 12 2

  5. ingest-ui ingest-ui Public

    HuBMAP Data Ingest Portal

    JavaScript 4

  6. ingest-pipeline ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    Python 4 5

Repositories

Showing 10 of 177 repositories
  • documentation Public

    General Documentation For HuBMAP

    hubmapconsortium/documentation’s past year of commit activity
    JavaScript 0 1 4 0 Updated Jan 8, 2025
  • ingest-api Public
    hubmapconsortium/ingest-api’s past year of commit activity
    Python 0 MIT 0 22 0 Updated Jan 8, 2025
  • search-api Public

    HuBMAP search service and associated pieces to create an index

    hubmapconsortium/search-api’s past year of commit activity
    Python 2 MIT 2 21 1 Updated Jan 8, 2025
  • entity-api Public

    A set of web service calls to return information about HuBMAP entities

    hubmapconsortium/entity-api’s past year of commit activity
    Python 3 MIT 1 50 2 Updated Jan 8, 2025
  • ccf-validation-tools Public

    HRA ASCT+B Validation Reports

    hubmapconsortium/ccf-validation-tools’s past year of commit activity
    Python 6 Apache-2.0 1 4 3 Updated Jan 8, 2025
  • hra-hubmap-kpmp-integration Public

    [WIP] repo for exploring HRA HuBMAP + KPMP Integration

    hubmapconsortium/hra-hubmap-kpmp-integration’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jan 7, 2025
  • portal-ui Public

    HuBMAP Data Portal front end

    hubmapconsortium/portal-ui’s past year of commit activity
    TypeScript 12 MIT 2 200 30 Updated Jan 7, 2025
  • user_workspaces_server Public
    hubmapconsortium/user_workspaces_server’s past year of commit activity
    Python 0 MIT 1 6 0 Updated Jan 7, 2025
  • ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    hubmapconsortium/ingest-pipeline’s past year of commit activity
    Python 4 MIT 5 79 16 Updated Jan 7, 2025
  • ingest-ui Public

    HuBMAP Data Ingest Portal

    hubmapconsortium/ingest-ui’s past year of commit activity
    JavaScript 4 MIT 0 98 (1 issue needs help) 1 Updated Jan 7, 2025
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