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msigdbr Public
MSigDB gene sets for multiple organisms in a tidy data format
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genomics Public
A collection of scripts and notes related to genomics and bioinformatics
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nichexplorer Public
An interactive query and visualization tool for populations of the bone marrow niche
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sns Public
Analysis pipelines for genomic sequencing data
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BetterChatGPT Public
Forked from ztjhz/BetterChatGPTAn amazing UI for OpenAI's ChatGPT
TypeScript Creative Commons Zero v1.0 Universal UpdatedMay 22, 2024 -
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clustermole Public
Unbiased single-cell transcriptomic data cell type identification
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presto Public
Forked from immunogenomics/prestoFast Wilcoxon and auROC
Jupyter Notebook UpdatedMar 15, 2024 -
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phenomenalist Public
Analysis Toolkit for PhenoCycler (CODEX) Data in R
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seurat5 Public
Forked from satijalab/seuratR toolkit for single cell genomics
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leiden Public
Forked from TomKellyGenetics/leidenImplementation of the Leiden algorithm called by reticulate in R. (CRAN)
R GNU General Public License v3.0 UpdatedFeb 24, 2023 -
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awesome-expression-browser Public
Forked from federicomarini/awesome-expression-browser😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
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numbat Public
Forked from kharchenkolab/numbatHaplotype-aware CNV analysis in scRNA-Seq
R UpdatedJun 9, 2022 -
diffcyt Public
Forked from lmweber/diffcytR package for differential discovery analyses in high-dimensional cytometry data
R MIT License UpdatedMay 24, 2022 -
setup-miniconda Public
Forked from conda-incubator/setup-minicondaSet up your GitHub Actions workflow with conda via miniconda
TypeScript MIT License UpdatedFeb 5, 2022 -
reference-genomes Public
Reference sequences and annotation files for commonly analyzed organisms
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maftools Public
Forked from PoisonAlien/maftoolsSummarize, Analyze and Visualize MAF files from TCGA or in house studies.
R MIT License UpdatedMay 24, 2021 -
STvEA Public
Forked from CamaraLab/STvEASpatially-resolved Transcriptomics via Epitope Anchoring
R GNU General Public License v3.0 UpdatedMay 18, 2021 -
singleCellTK Public
Forked from compbiomed/singleCellTKInteractively Analyze scRNA-Seq Data
R Other UpdatedMay 4, 2021 -
dplyr Public
Forked from tidyverse/dplyrdplyr: A grammar of data manipulation
R Other UpdatedNov 30, 2020 -
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just-the-docs Public
Forked from just-the-docs/just-the-docsA modern, high customizable, responsive Jekyll theme for documention with built-in search.
CSS MIT License UpdatedMay 22, 2020 -