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  • University of Chinese Academy of Sciences
  • Beijing
  • 14:05 (UTC +08:00)

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Achievement: Pull Shark

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Achievement: Pull Shark

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4 stars written in Cython
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pysam-developers / pysam

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

Cython 792 274 Updated Oct 30, 2024

schneebergerlab / syri

Synteny and Rearrangement Identifier

Cython 351 38 Updated Dec 11, 2024

althonos / pyrodigal

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!

Cython 145 7 Updated Nov 12, 2024

althonos / pyfastani

Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.

Cython 20 1 Updated Dec 5, 2024

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