Pipeline for analyzing (rare) mutations in metagenome-assembled genomes

The hub for EleutherAI's work on interpretability and learning dynamics

A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences

Magnificent app which corrects your previous console command.

Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.

pytorch distribute tutorials

ViBE: a hierarchical BERT model to identify viruses using metagenome sequencing data

Large Concept Models: Language modeling in a sentence representation space

Bringing BERT into modernity via both architecture changes and scaling

A chatbot/GraphRAG framework that creates multi-llm-agents from social platform user comments and let them debate on specific topics.

📊 Simple package for monitoring and control your NVIDIA Jetson [Orin, Xavier, Nano, TX] series

🐉 🪰 Assemble bacterial isolate genomes from Nanopore reads

Multiple Protein Structure Alignment at Scale with FoldMason

深度学习经典、新论文逐段精读

Genomic language model predicts protein co-regulation and function

An open-source, cross-platform terminal for seamless workflows

Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

Python tool for converting files and office documents to Markdown.

Code for BLT research paper

Method for inferring path posterior probabilities and abundances from pangenome graph read alignments

An extremely fast Python package and project manager, written in Rust.

Virus identification from metagenomic data

phyloFlash - A pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.

NCCL Tests