API: renamed app from piqtree_jc_distances to piqtree_jc_dists

iqtree · Nov 20, 2024 · 20c8ff9 · 20c8ff9
1 parent 0f9bf34
commit 20c8ff9
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/src/piqtree2/_app/__init__.py b/src/piqtree2/_app/__init__.py
@@ -89,8 +89,8 @@ def piqtree_random_trees(
 
 @composable.define_app
 @extend_docstring_from(nj_tree)
-def piqtree_jc_distances(
-    aln: cogent3.Alignment | cogent3.ArrayAlignment,
+def piqtree_jc_dists(
+    aln: c3_types.AlignedSeqsType,
 ) -> c3_types.PairwiseDistanceType:
     return jc_distances(aln)
 
@@ -105,6 +105,6 @@ def piqtree_nj(dists: c3_types.PairwiseDistanceType) -> cogent3.PhyloNode:
     "piqtree_phylo",
     "piqtree_fit",
     "piqtree_random_trees",
-    "piqtree_jc_distances",
+    "piqtree_jc_dists",
     "piqtree_nj",
 ]
diff --git a/tests/test_app/test_app.py b/tests/test_app/test_app.py
@@ -54,7 +54,7 @@ def test_piqtree_random_trees(
 
 
 def test_piqtree_jc_distances(five_otu: ArrayAlignment) -> None:
-    app = get_app("piqtree_jc_distances")
+    app = get_app("piqtree_jc_dists")
     dists = app(five_otu)
 
     assert (