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Add reportErrorProfiles() for repeats.
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brianwalenz committed Aug 10, 2017
1 parent 1ab6f3c commit b2ef408
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1 change: 1 addition & 0 deletions src/bogart/bogart.C
Original file line number Diff line number Diff line change
Expand Up @@ -518,6 +518,7 @@ main (int argc, char * argv []) {
setLogFile(prefix, "breakRepeats");

contigs.computeErrorProfiles(prefix, "repeats");
contigs.reportErrorProfiles(prefix, "repeats");

vector<confusedEdge> confusedEdges;

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