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1. EASTR EASTR Public

   Emending Alignment of Spliced Transcript Reads

   Python 11

2. readthedocs readthedocs Public

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   Documentation for the ISB-CGC on Read the Docs.

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3. somalier somalier Public

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   fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

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4. covid19-brain covid19-brain Public

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   Code for reproducing figures from Mavrikaki, Lee et al. (submitted)

5. RNA-seq-analysis RNA-seq-analysis Public

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   RNAseq analysis notes from Ming Tang

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6. EASTR_analyses EASTR_analyses Public

   This repository contains the code and workflow used to evaluate the performance of the EASTR algorithm for our publication on EASTR.

   Jupyter Notebook