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johndef64 Follow

Overview Repositories 9 Projects 0 Packages 0 Stars 118

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johndef64

John johndef64

As a computational biologist, my journey is a blend of reality and dreams, navigating the delicate interface where science and imagination converge.

6 followers · 14 following

https://linktr.ee/johndef64

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Overview Repositories 9 Projects 0 Packages 0 Stars 118

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mychatgpt Public

mychatgpt is a small and useful Python package that provides utils to create OpenAI's GPT conversational agents. This module allows users to have interactive chat with GPT models and keeps track of…

openai multi-modal text2speech speech2text text2image generative-pretrained-transformer

Jupyter Notebook 6 Updated Jan 16, 2025
johndef64.github.io Public

HTML Updated Jan 7, 2025
grpm_bertopic Public

natural-language-processing topic-modeling genetic-variants literature-mining nutrigenomics hdbscan-clustering-algorithm

Jupyter Notebook 1 MIT License Updated Nov 28, 2024
GRPM_system Public

Computational Strategies in Nutrigenetics: Constructing a Reference Dataset of Nutrition-Associated Genetic Polymorphisms https://doi.org/10.1101/2023.08.04.23293659

data-integration semantic-similarity gwas-catalog nutrigenomics biobert personalized-nutrition

Jupyter Notebook 4 Updated Nov 25, 2024
test_docker_jupyter_conda_torch Public

Dockerfile Updated Jul 25, 2024
semantic_enrichment_golph3 Public

Jupyter Notebook Updated Jul 15, 2024
bertopic_graph Public

This repo offers a workflow dedicated to utilizing BERTopic for Semantic Graph-based information retrieval in nutrigenomics. It includes Jupyter notebooks on topic modeling and semantic graph creat…

natural-language-processing genomics knowledge-graph gene-network topicmodeling

Jupyter Notebook 1 Updated May 23, 2024
pyutilities_datascience Public

Jupyter Notebook Updated May 17, 2024
GRPM_trial_data Public

1 Updated Jul 14, 2023

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John johndef64

mychatgpt Public

johndef64.github.io Public

grpm_bertopic Public

GRPM_system Public

test_docker_jupyter_conda_torch Public

semantic_enrichment_golph3 Public

bertopic_graph Public

pyutilities_datascience Public

GRPM_trial_data Public