app-doc/doxygen: Avoid dereferencing NULL pointer

Gentoo-bug: 607160
* Thank you to Jiri Netolicky for finding the
  upstream issue and the commit that fixed it.

Package-Manager: Portage-2.3.3, Repoman-2.3.1

app-doc/doxygen/doxygen-1.8.13.ebuild → app-doc/doxygen/doxygen-1.8.13-r1.ebuild

@@ -55,6 +55,7 @@ RESTRICT="test"
 PATCHES=(
 	"${FILESDIR}/${PN}-1.8.9.1-empty-line-sigsegv.patch" #454348
 	"${FILESDIR}/${PN}-1.8.12-link_with_pthread.patch"
+	"${FILESDIR}/${PN}-1.8.13-NULL-dereference.patch"
 )
 
 DOCS=( LANGUAGE.HOWTO README.md )
@@ -64,7 +65,7 @@ pkg_setup() {
 }
 
 src_prepare() {
-	default
+	cmake-utils_src_prepare
 
 	# Ensure we link to -liconv
 	if use elibc_FreeBSD && has_version dev-libs/libiconv || use elibc_uclibc; then
@@ -82,12 +83,13 @@ src_prepare() {
 		doc/maintainers.txt || die
 
 	if is-flagq "-O3" ; then
-		echo
+		ewarn
 		ewarn "Compiling with -O3 is known to produce incorrectly"
 		ewarn "optimized code which breaks doxygen."
-		echo
+		ewarn
+		elog
 		elog "Continuing with -O2 instead ..."
-		echo
+		elog
 		replace-flags "-O3" "-O2"
 	fi
 }

app-doc/doxygen/files/doxygen-1.8.13-NULL-dereference.patch

@@ -0,0 +1,24 @@
+From 0f02761a158a5e9ddbd5801682482af8986dbc35 Mon Sep 17 00:00:00 2001
+From: albert-github <[email protected]>
+Date: Wed, 4 Jan 2017 12:24:55 +0100
+Subject: [PATCH] Bug 776791 - [1.8.13 Regression] Segfault building the
+ breathe docs
+
+Protected against NULL pointer of variable al
+---
+ src/xmlgen.cpp | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/src/xmlgen.cpp b/src/xmlgen.cpp
+index fe95c7a..70e198a 100644
+--- a/src/xmlgen.cpp
++++ b/src/xmlgen.cpp
+@@ -620,7 +620,7 @@ static void generateXMLForMember(MemberDef *md,FTextStream &ti,FTextStream &t,De
+     if (md->isInline()) t << "yes"; else t << "no";
+     t << "\"";
+
+-    if (al->refQualifier!=RefQualifierNone)
++    if (al!=0 && al->refQualifier!=RefQualifierNone)
+     {
+       t << " refqual=\"";
+       if (al->refQualifier==RefQualifierLValue) t << "lvalue"; else t << "rvalue";