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Commits on Nov 18, 2017

• sci-biology/arb: Version bump to 6.0.6

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  Peter-Levine

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  SoapGentoo

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Commits on Nov 16, 2017

• sci-biology/kallisto: Initial addition

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  SoapGentoo

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• sci-biology/STAR: Initial addition

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  SoapGentoo

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• sci-biology/HTSeq: Initial addition

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Commits on Nov 2, 2017

• sci-biology/bamtools: Minor fixes

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  SoapGentoo

  committed
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• sci-biology/bamtools: Remove old

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  SoapGentoo

  committed
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• sci-biology/bamtools: Add live ebuild

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  SoapGentoo

  committed
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• sci-biology/bamtools: Version bump to 2.4.2

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  SoapGentoo

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Commits on Oct 27, 2017

• sci-biology/trnascan-se: remove unused patches.

  

  mm1ke

  authored and

  monsieurp

  committed
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• sci-biology/psipred: remove unused patch.

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  mm1ke

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  monsieurp

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Commits on Oct 4, 2017

• sci-biology/gibbs: remove unused file.

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  mm1ke

  authored and

  monsieurp

  committed
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• sci-biology/fasta: Strip empty metadata.xml elements

  mgorny

  committed
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• sci-biology/ApE: Strip empty metadata.xml elements

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Commits on Sep 30, 2017

• sci-biology/eugene: remove 4.1

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  Michael Palimaka

  committed
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• sci-biology/eugene: stabilise 4.1d for amd64/x86

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  Michael Palimaka

  committed
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• sci-biology/clustal-omega: remove 1.2.1/1.2.3

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  Michael Palimaka

  committed
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• sci-biology/clustal-omega: stabilise 1.2.4 for amd64/x86

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  Michael Palimaka

  committed
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Commits on Sep 26, 2017

• sci-biology/hmmer: Cleanup broken versions re bug #421799

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  kentfredric

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• sci-biology/hmmer: de-stabilize

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  kentfredric

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Commits on Sep 22, 2017

• sci-biology/goby: Fix path to protobuf-java in EANT_GENTOO_CLASSPATH.

  

  Arfrever Frehtes Taifersar Arahesis

  authored and

  floppym

  committed
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Commits on Sep 21, 2017

• sci-biology/goby: Depend directly on dev-java/protobuf-java.

  

  Arfrever Frehtes Taifersar Arahesis

  authored and

  floppym

  committed
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• sci-biology/foldingathome: drop old 7.4.4-r1 ebuild

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  axs-gentoo

  committed
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• sci-biology/foldingathome: minor ebuild improvements

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  axs-gentoo

  committed
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Commits on Sep 20, 2017

• sci-biology/foldingathome: misc ebuild impovements

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  axs-gentoo

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Commits on Sep 17, 2017

• sci-biology/pysam: Remove old

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  SoapGentoo

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• sci-biology/pysam: Version bump to 0.12.0.1

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Commits on Sep 16, 2017

• sci-biology/cufflinks: Fix boost TR1 header include

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  SoapGentoo

  committed
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Commits on Sep 2, 2017

• sci-biology/pysam: Fix broken relative -I

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  SoapGentoo

  committed
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• sci-biology/samtools: Add missing -I. to CPPFLAGS

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  SoapGentoo

  committed
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• sci-biology/velvet: update make.conf path

  

  Francesco Turco

  authored and

  Michael Palimaka

  committed
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• sci-biology/samtools: Remove old

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  SoapGentoo

  committed
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• sci-biology/pysam: Remove old

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• sci-biology/bwa: Remove old

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• sci-biology/bcftools: Add 1.5 from sci overlay

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  SoapGentoo

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• sci-biology/pysam: Bump to 0.12

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