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Rename cleanReads_V8.txt to extra_files/cleanReads_V8.txt
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joshuakirsch authored Oct 19, 2023
1 parent 06ead3f commit 1b29d16
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion cleanReads_V8.txt → extra_files/cleanReads_V8.txt
Original file line number Diff line number Diff line change
Expand Up @@ -48,4 +48,4 @@ megahit -1 read1.fastq -2 read2.fastq \
--presets meta-large

seqkit replace -p .+ -r "${i}_{nr}" assemblies/${i}_assemblies/final.contigs.fa > assemblies/${i}_contigs.fa
done
done

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