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joshuakirsch authored Nov 11, 2024
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The ISOSDB V3 is available in this repo as ISOSDB.V3.fna.zip
This program finds the location of IS elements that were missed during assembly from complex populations, such as gut metagenomes, using a split-read approach. If you use this tool, please cite this paper: https://pubmed.ncbi.nlm.nih.gov/38565143/

This program uses the Insertion Sequence Open Source Database (ISOSDB). The ISOSDB V3 is available in this repo as ISOSDB.V3.fna.zip

To use the pseudoR pipeline, please read the following:

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