GUI/CommandLine Tool Box for biologistists to utilize NGS data.

公众号[庄闪闪的成长手册]对应的R资料（代码+数据）

dada2 formatted nifH database

Using R language in microbiome analysis

Easy Amplicon data analysis pipeline

Metagenome analysis pipeline

A list of R packages that are focused on Ecology

Interpretation and visualization of microbiome charts

Drawing a Combination Chart of a Science Published Article

《R语言数据可视化之美》配套代码

R scripts for performing co-occurrence analyses

ggplot2: elegant graphics for data analysis

Interactively explore metagenomes and more from a web browser.

The second version of the Kraken taxonomic sequence classification system

microbiome R package

Posit Cheat Sheets - Can also be found at https://posit.co/resources/cheatsheets/.

Code for biostar tutorials - mostly R and Perl

Deblur is a greedy deconvolution algorithm based on known read error profiles.

Bioinformatics pipelines for microbial amplicon sequence data (demultiplexed, paired-end reads), sequenced on the Illumina MiSeq platform.

Scripts for data analysis of metagenomic sequencing of urban environments in Montevideo.

R package for Statistical Inference of Associations between Microbial Communities And host phenoType

Generating iToL annotations from Spreadsheet or CSV files

Statistics and visualization for amplicon data

Rmd source files for the HarvardX series PH525x