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A Go package for engineering organisms.

Go 690 73 Updated Oct 21, 2024

Biological foundation modeling from molecular to genome scale

Jupyter Notebook 1,264 156 Updated Dec 18, 2024

Official home of genome aligner based upon notion of Cactus graphs

C 547 112 Updated Jan 29, 2025

A library of free open source icons for science illustrations in biology and chemistry

Vue 1,409 79 Updated Feb 5, 2025

Python package for doing RPA

Python 5,056 680 Updated Sep 5, 2024

Open source code for AlphaFold 2.

Python 13,132 2,320 Updated Jan 29, 2025

"Cyberpunk style" for matplotlib plots

Python 1,727 73 Updated Nov 28, 2024

A "Geom" for creating charts with a cyberpunk aesthetic

R 97 3 Updated Nov 15, 2021

💉 Stuff which works in Chrome and maybe Acrobat and Foxit.

Python 1,604 50 Updated Oct 30, 2020

Command-line program to download videos from YouTube.com and other video sites

Python 133,980 10,194 Updated Jan 22, 2025

📈Financial Markowitz Portfolio Optimization (Bonds, Stocks, Commodities), including classical Efficient Frontier, Utility Function etc.

Jupyter Notebook 39 8 Updated Nov 10, 2020

An accurate GFF3/GTF lift over pipeline

Python 464 55 Updated Aug 1, 2023

Gene cluster comparison figure generator

Python 552 71 Updated Nov 25, 2024

Find clustered hits from a BLAST search

HTML 109 25 Updated Dec 6, 2024

Report salient qPCR primer/probe or immune epitope mismatches info against a set of pathogen isolate genomes

Perl 14 10 Updated Jan 14, 2025

Inspire future generations by providing the most exciting and diverse speakers for your conference.

HTML 280 150 Updated Oct 31, 2019

A scriptable scratchpad for developers. In slow yet steady progress.

JavaScript 3,883 363 Updated Jun 30, 2024

n³ The unorthodox terminal file manager

C 19,653 768 Updated Feb 5, 2025

Gfapy: a flexible and extensible software library for handling sequence graphs in Python

Python 66 7 Updated Oct 27, 2024

Prediction of prophages from bacterial genomes

Jupyter Notebook 74 21 Updated Nov 10, 2023

🖥 Control your display's brightness & volume on your Mac as if it was a native Apple Display. Use Apple Keyboard keys or custom shortcuts. Shows the native macOS OSDs.

Swift 28,886 839 Updated Jan 20, 2025

Calculation of interatomic interactions in molecular structures

Python 83 20 Updated Sep 3, 2024

Rich is a Python library for rich text and beautiful formatting in the terminal.

Python 50,565 1,777 Updated Dec 2, 2024

baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).

Python 97 29 Updated Sep 27, 2024

Manage your dotfiles across multiple diverse machines, securely.

Go 14,039 502 Updated Feb 5, 2025

A Zsh theme

Shell 47,745 2,241 Updated Jan 29, 2025

Runs your toot on an 8-bit computer emulator

JavaScript 109 8 Updated Jan 22, 2025
Python 129 10 Updated Jun 2, 2023

The fast conda package builder, based on mamba

Python 254 56 Updated Dec 5, 2024

shell tools for processing phylogenetic trees

C 106 31 Updated Aug 30, 2022
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