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Commits on Apr 10, 2020

• Merge branch 'develop' into fix/FeatureScatter_cells

  andrewwbutler

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• minor style tweaks

  andrewwbutler

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Commits on Apr 9, 2020

• Add stip.suffix option to Read10X

  timoast

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Commits on Apr 8, 2020

• merge

  andrewwbutler

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• merge

  andrewwbutler

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• add docs for split violin message option

  andrewwbutler

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• Merge branch 'develop' into fix/UMAPPredict

  andrewwbutler

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• Update documentation

  mojaveazure

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• add uwot-learn docu

  yuhanH

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Commits on Apr 7, 2020

• Update documentation

  mojaveazure

  committed
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Commits on Apr 6, 2020

• Fix case when no split; replace multi.group to split.plot

  timoast

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Commits on Mar 27, 2020

• fix return value description for MixingMetric

  andrewwbutler

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Commits on Mar 24, 2020

• minor fixes to new UMAP projection code, roxygen2 update

  andrewwbutler

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Commits on Mar 23, 2020

• Merge branch 'develop' into fix/DotPlotOneidentity

  andrewwbutler

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Commits on Mar 20, 2020

• Merge branch 'develop' into fix/activitymatrix

  andrewwbutler

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Commits on Mar 13, 2020

• add scale option

  yuhanH

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• Add keep.sparse parameter; satijalab#2359

  timoast

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• fix some doc typos

  andrewwbutler

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• Merge branch 'develop' into fix/DocImprovements

  andrewwbutler

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• examples + formatting

  andrewwbutler

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Commits on Mar 11, 2020

• Add runable examples using SeuratData package

  timoast

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• Add simple examples and hyperlinks to paper

  timoast

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Commits on Mar 10, 2020

• add paper reference

  andrewwbutler

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• update TransferData man page

  andrewwbutler

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Commits on Mar 9, 2020

• deprecate redundant sort.cell parameter

  andrewwbutler

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• improve docs for IntegrateData

  andrewwbutler

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Commits on Mar 5, 2020

• update FindTransferAnchors man page

  andrewwbutler

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Commits on Mar 4, 2020

• Merge branch 'develop' into fix/multtestDep

  mojaveazure

  committed
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• update FindIntegrationAnchors docs, update CITATION

  andrewwbutler

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Commits on Mar 3, 2020

• move limma to suggests but use if available

  andrewwbutler

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• Move metap to suggests, add install message

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  andrewwbutler

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• Improvements to integration documentation

  timoast

  committed
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• improve some integration fxn man pages

  andrewwbutler

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Commits on Feb 18, 2020

• fix for multi-sct merges

  andrewwbutler

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Commits on Feb 13, 2020

• Readd combine parameter for plots

  mojaveazure

  committed
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