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  • 06:58 (UTC -08:00)
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  • Package for loading and processing fiber photometry data

    Python 2 MIT License Updated Dec 18, 2024
  • Lightweight python package for downloading neuron morphologies from the NeuroMorpho archives.

    Python MIT License Updated Nov 1, 2024
  • uv-cookie Public

    Cookiecutter template for python using `uv`

    Python Updated Oct 31, 2024
  • Code to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"

    Jupyter Notebook MIT License Updated Jun 18, 2024
  • List of my publications and poster presentations

    Updated Jan 30, 2024
  • Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.

    Python BSD 3-Clause "New" or "Revised" License Updated Jan 17, 2024
  • code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook Other Updated Jan 17, 2024
  • Compute bootstrapped confidence intervals for event-related transients.

    Python Updated Aug 23, 2022
  • Semi-automated cell counting with ImageJ macros.

    ImageJ Macro MIT License Updated May 11, 2022