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fiberphotopy Public
Package for loading and processing fiber photometry data
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neuromorphopy Public
Lightweight python package for downloading neuron morphologies from the NeuroMorpho archives.
Python MIT License UpdatedNov 1, 2024 -
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ssl_neuron Public
Forked from marissaweis/ssl_neuronCode to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"
Jupyter Notebook MIT License UpdatedJun 18, 2024 -
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rivuletpy Public
Forked from RivuletStudio/rivuletpyRobust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 17, 2024 -
AllenSDK Public
Forked from AllenInstitute/AllenSDKcode for reading and processing Allen Institute for Brain Science data
Jupyter Notebook Other UpdatedJan 17, 2024 -
bootstrap_ci Public
Compute bootstrapped confidence intervals for event-related transients.
Python UpdatedAug 23, 2022 -
imagej_cellcount Public
Semi-automated cell counting with ImageJ macros.
ImageJ Macro MIT License UpdatedMay 11, 2022