kushalkolar
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scikit-ophys Public
Trying to alleviate the pain associated with calcium imaging analysis
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wgpu-py Public
Forked from pygfx/wgpu-pyNext generation GPU API for Python
Python BSD 2-Clause "Simplified" License UpdatedJan 6, 2025 -
rendercanvas Public
Forked from pygfx/rendercanvasOne canvas API, multiple backends
Python BSD 2-Clause "Simplified" License UpdatedDec 26, 2024 -
pygfx Public
Forked from pygfx/pygfxPowerful and versatile visualization for Python.
Python BSD 2-Clause "Simplified" License UpdatedDec 25, 2024 -
imageio-binaries Public
Forked from imageio/imageio-binariesRepo to place the (relatively small) binary libraries
UpdatedDec 25, 2024 -
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gpu-binding-unbinding Public
scripts for unbinding or rebinding my nvidia GPU and reloading drivers
Shell UpdatedNov 3, 2024 -
mesmerize-viz Public
Widgets for calcium imaging analysis visualization in notebooks
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caiman-core Public
Forked from flatironinstitute/CaImAnComputational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
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wgpu-compute-shaders-sandbox Public
learning compute shaders to see if we can eventually implement standard matrix decompositions in wgsl
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedAug 12, 2024 -
jupyter_rfb Public
Forked from vispy/jupyter_rfbRemote Frame Buffer for Jupyter
Python MIT License UpdatedMay 17, 2024 -
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localmd Public
Forked from apasarkar/localmdAccelerated local matrix decomposition for calcium imaging data
Python GNU General Public License v3.0 UpdatedJan 3, 2024 -
ccn-template Public
Forked from flatironinstitute/ccn-templateTemplate repository for CCN software projects
Python BSD 3-Clause "New" or "Revised" License UpdatedDec 11, 2023 -
MESmerize Public archive
Platform for Calcium Imaging analysis. DEPRECATED.
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pipeline_2p Public
Forked from NeuroNetMem/pipeline_2pPreprocessing pipeline for 2p imaging data, VR behaviour data and synchronization between the two.
Jupyter Notebook UpdatedOct 20, 2023 -
pynapple Public
Forked from pynapple-org/pynapplePYthon Neural Analysis Package 🍍
Python MIT License UpdatedOct 3, 2023 -
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napari Public
Forked from napari/naparinapari: a fast, interactive, multi-dimensional image viewer for python
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 16, 2023 -
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LinAlg4DataScience Public
Forked from mikexcohen/LinAlg4DataScienceCode that accompanies the book "Linear Algebra for Data Science"
Jupyter Notebook UpdatedJul 12, 2023 -
gpu-passthrough-tutorial Public
Forked from bryansteiner/gpu-passthrough-tutorialShell GNU General Public License v3.0 UpdatedJun 11, 2023 -
serenity Public
Realtime analysis & visualization of calcium imaging data
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lazytensor Public
An interface for lazy evaluation of tensors in linear algebra routines
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improv Public
Forked from project-improv/improvAdaptive Platform for Neuroscience Experiments
Python MIT License UpdatedApr 26, 2023 -
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rnn-go-brr Public
Sentient food pellet grabber project for deep learning class
Jupyter Notebook GNU General Public License v3.0 UpdatedDec 1, 2022 -
tifffile Public
Forked from cgohlke/tifffileRead and write TIFF files. Forked from https://pypi.org/project/tifffile
Python BSD 3-Clause "New" or "Revised" License UpdatedOct 17, 2022 -
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staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 22, 2022