Helper/wrapper functions for executing coloc & associated analyses

corrplot of LDSC genetic correlation results

Software for estimating correlation of trait effect sizes across populations

A curated list of RL resources

A curated list of resources for using LLMs to develop more competitive grant applications.

Lab Presentation on Improving command-line usage, 15th of January

[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome

Deep learning for HIV

Deep learning for predicting and elucidating human T-lymphotrophic virus 1 integration in the human genome

Deep learning for elucidating HTLV-1 integration sites

A collection of various utilities for GWAS summary statistics

Code and data for GeneGPT.

Open source annotation tool for machine learning practitioners.

PyTorch Implementation of BioBERT

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

12 Weeks, 24 Lessons, AI for All!

Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining

此项目是机器学习(Machine Learning)、深度学习(Deep Learning)、NLP面试中常考到的知识点和代码实现，也是作为一个算法工程师必会的理论基础知识。

The official GitHub page for the survey paper "A Survey of Large Language Models".

Open-source scientific and technical publishing system built on Pandoc.

NicheNet: predict active ligand-target links between interacting cells

A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better characterization of cell-cell communication.

Visualize and annotate genomic coverage with ggplot2

Analyzing and visualizing KEGG information using the grammar of graphics

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome