Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/

High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers

A set of tools to analyse the output from TraDIS analyses

📝 Python3 module for deleting Slack messages and files using the Slack REST API

Using R language in microbiome analysis

Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat

BEEM: Estimating Lotka-Volterra models from time-course microbiome sequencing data

hybrid assembly pipeline for bacterial genomes

PhD Thesis template rebuilding Aaron Turon's thesis

Quickly search, compare, and analyze genomic and metagenomic data sets.

Materials for the STAMPS 2022 course at the MBL in Woods Hole, MA, USA

Repository to host tool-specific module files for the Nextflow DSL2 community!

Python tool for fast ENA FASTQ downloads