Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny

Repository of bioinformatics tools, pipelines, recipes and more, with a focus on bacteriophages.

Murmur3 hash in C

Comprehensive analysis of Genbank prophage distributions

Naming avoiding ambiguity automatically assigning valid identifiers

A python implementation of flux balance analysis to model microbial metabolism

Sets up an autoscaled Jetstream cluster for SRA work

Sequencing and analysis of crAssphage regions from around the globe

Updated fork of T. Finley's PyGLPK module

A repository for the Prosilica Camera GUI

The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installation instructions and full feature documentation.