Peptide Predictor - this program will annotate all proteins predicted to generate proteolytic cleavage products

Sidechain conditioning and modeling for full-atom protein sequence design

Let LLM run your MDs.

21 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/

https://www.sc-best-practices.org

RosettaDesign using PyRosetta

scripts for analyzing cyclic peptide designs

This template for an academic CV serves the peculiarities for academics. Academic applicants need to show everything they have done. This makes it a bit cumbersome doing it by single entries. In ad…

Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning

Making Protein Design accessible to all via Google Colab!

Genome modeling and design across all domains of life

Get your documents ready for gen AI

A collection of simple Tensorflow examples on Google Colab.

Generation of protein sequences and evolutionary alignments via discrete diffusion models

Foldseek enables fast and sensitive comparisons of large structure sets.

Multiple Protein Structure Alignment at Scale with FoldMason

Find codon frequency and usage bias

Introduction to Bash for bioinformatics

Python Fundamentals for Biologists

Notes from "Data Science at the Command Line" by Jeron Janssens

A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessible.

R Fundamentals for Biologists

scikit-learn classes for molecular vectorization using RDKit

Cloud-based molecular simulations for everyone

Generation of diagrams like flowcharts or sequence diagrams from text in a similar manner as markdown

About Interactive web viewer for exploring large neural networks—powers the graph visualization of Talaria

Neo: Hierarchical Confusion Matrix Visualization (CHI 2022)