7 Issues closed by 2 people

• issue with assembly of plant genome sample

  #315 closed Jan 27, 2025

• Trio mode：phasing error

  #312 closed Jan 24, 2025

• Hi-C mode: library missing

  #316 closed Jan 23, 2025

• Verkko Program Completion without Actually Completing

  #314 closed Jan 17, 2025

• Verkko assemblies contiguity with respect to Hifiasm

  #301 closed Jan 8, 2025

• stuck in 8-hicPipeline

  #313 closed Jan 8, 2025

• Can someone show the command to run on SLURM GRID?

  #310 closed Jan 2, 2025

4 Issues opened by 4 people

• verkko 2.2.1 - Hi-C scaffolding error `TypeError: object of type 'int' has no len()`

  #319 opened Jan 26, 2025

• Test data can't be downloaded

  #318 opened Jan 24, 2025

• Hi-C Scaffolding Error

  #317 opened Jan 23, 2025

• Unmapped Region in Y Chromosome Assembly Using Verkko

  #311 opened Jan 2, 2025

2 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• The --paths option can re-run the pipeline when initial asm or input file timestamps are updated

  #308 commented on Jan 2, 2025 • 0 new comments

• Questions related to interpretation results phased assembly.

  #245 commented on Jan 12, 2025 • 0 new comments