Simulation and inference of gene regulatory networks based on transcriptional bursting

Fully-sharded data parallelism (FSDP) in jax with minimal code changes.

ESM2 protein language models in JAX/Flax

Window peeking for macOS

LLM benchmark: Generate an SVG of a pelican riding a bicycle

GNN implemented using JAX and Equinox

Official repository for the Boltz-1 biomolecular interaction model

Python Implementation of Reinforcement Learning: An Introduction

Solve puzzles. Improve your pytorch.

Classical equations and diagrams in machine learning

This is a list of links to different freely available learning resources about computer programming, math, and science.

🖼 imgcat in Python (for iTerm2)

Advanced Python Mastery (course by @dabeaz)

MIT IAP short course: Matrix Calculus for Machine Learning and Beyond

Google Colab Tutorials for IBM3202

wxMacMolPlt is a graphical user interface principally for the GAMESS program

Simple transformer implementation from scratch in pytorch. (archival, latest version on codeberg)

Allegro is an open-source code for building highly scalable and accurate equivariant deep learning interatomic potentials

Taking Bio Sensors Out Of The Lab. Modular , low-cost,

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

Must-read papers on graph neural networks (GNN)

💜 LaTeX math wherever you want

Ten great papers for wet lab biologists starting out in computational biology

Open source code for AlphaFold 2.

PyTorch implementation of Advantage Actor Critic (A2C), Proximal Policy Optimization (PPO), Scalable trust-region method for deep reinforcement learning using Kronecker-factored approximation (ACKT…

Advanced Deep Learning and Reinforcement Learning course taught at UCL in partnership with Deepmind

Reimplementation of World-Models (Ha and Schmidhuber 2018) in pytorch

PyTorch on Kubernetes

Catch CSS curve balls.

Dream to Control: Learning Behaviors by Latent Imagination