Tags: mbdunn/echopype
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Merge pull request OSOceanAcoustics#709 from OSOceanAcoustics/dev Release/v0.6.0
Merge pull request OSOceanAcoustics#560 from OSOceanAcoustics/dev Release/v0.5.6
Bump miniforge version to 4.11.0-0 (OSOceanAcoustics#515) * Bump miniforge version * Add step to update mamba to latest
Release/v0.5.4 (OSOceanAcoustics#448) * re-attach sonar_model to combined echodata object (OSOceanAcoustics#437) * Correct duplicate ping_times during EK60 conversion (fixes OSOceanAcoustics#235) (OSOceanAcoustics#433) * Add fix for duplicate ping_time * Remove dead code * Increment by 1ns instead of 1ms * Add duplicate ping time warning and store in provenance * Autoformatter * Add test for duplicate ping times file * Add qc method to remove duplicate pings * Drop entire pings with duplicate values * Store entire original ping_time and add attribute when there are duplicate ping_times * Remove duplicate ping_time qc method, it will be added back in future PR * Change EchoData combine ping_time reversal attribute to netCDF encodable value * Remove unused import * Update tests * Clarify duplicate ping_time removal and drop warnings * Add removal note to deprecation warnings (OSOceanAcoustics#443) * Add removal note to deprecation warnings * Say removal will be specifically in next release * AD2CP conversion bug fixes (OSOceanAcoustics#438) * Allow strings in AD2CP config string data record * Add ping_time dimension to ahrs variables * Default AHRS to empty list instead of None * Change AHRS dims when it does not exist * Add update_platform method to EchoData (OSOceanAcoustics#434) * Add update_platform method to EchoData * Add test for update_platform * Use drop_vars instead of drop * Use .data on variables * Generalize extra_platform_data time dimension name * Add AZFP support * Generalized update_platform handling of CF trajectory-encoded datasets * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Default water_level to zeros instead of ones * Add warning for overwritten variables * Index incoming data by time2 * Add long_name for time2 * Show dropped variable warning when nans do not exist * Reword dropped variable warning * Rename mapping_get_multiple to mapping_search_variable Co-authored-by: Emilio Mayorga <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * Add summary statistics (OSOceanAcoustics#444) * initial add of echo metrics functions * update echo metrics to use range as data variable * small readability edit * added test functions to echopype.tests * Modified syntax for consistency * lint corrections on metrics * added docstrings * changed summary_statistics.py docstrings to numpy format * Clean up tabs in code * Clean up tabs in test code * add metrics to run-test.py * renamed test_metrics_summary_statistics * small debug edits * pre commit black edits * moved test_metrics_summary_statistics.py to /tests/metrics/ * docstring update, add typing, change inertia to dispersion * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci Co-authored-by: stuara <[email protected]> Co-authored-by: Landung "Don" Setiawan <[email protected]> Co-authored-by: stuara <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * Prepare workflows for master -> main (OSOceanAcoustics#445) * Add PathNotFoundError in _load_convert for open_converted (OSOceanAcoustics#447) * add PathNotFoundError in _load_convert for open_converted Co-authored-by: imranmaj <[email protected]> Co-authored-by: Emilio Mayorga <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: stuara <[email protected]> Co-authored-by: Landung "Don" Setiawan <[email protected]> Co-authored-by: stuara <[email protected]> Co-authored-by: Landung "Don" Setiawan <[email protected]>
Merge pull request OSOceanAcoustics#432 from OSOceanAcoustics/release… …/v0.5.3 Release/v0.5.3
Merge pull request OSOceanAcoustics#398 from OSOceanAcoustics/release… …/v0.5.2 Adding commits for release/v0.5.2
Merge pull request OSOceanAcoustics#386 from OSOceanAcoustics/release… …/0.5.1 Merge branch release/0.5.1 to master.
Small fixes to docs before v0.5.0 release (OSOceanAcoustics#354) * revert addition of .ad2cp conversion * add .ad2cp parsing back, fix refs of Sv to ds_Sv
Merge pull request OSOceanAcoustics#200 from leewujung/doc-update Update README and documentation
Merge pull request OSOceanAcoustics#170 from leewujung/doc-minor-change Minor change to docs: - add @lsetiawan to contributor list - update intro text
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