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a tool for inferring species tree from sequencing reads
⭐️ Companies that don't have a broken hiring process
Follow up to Grace Blackwell's 661k dataset, for 2023
Best practices & guides on how to write distributed pytorch training code
A playbook for systematically maximizing the performance of deep learning models.
Paper list about hyperbolic embedding, hyperbolic models,hyperbolic applications
The Fastest State-of-the-Art Static Embeddings in the World
Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction
Solve puzzles. Improve your pytorch.
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
📄 Awesome CV is LaTeX template for your outstanding job application
Python 3 API wrapper for Garmin Connect to get activity statistics
Download files from NCBI Entrez by accession
Scripts to download genomes from the NCBI FTP servers
Randomly subsample sequencing reads or alignments
Make your functions return something meaningful, typed, and safe!
A scientific instrument for investigating latent spaces
VGsim is a fast and scalable simulator of viral genealogies during global pandemic.
Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch