mgarber
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covid-19-data Public
Forked from nytimes/covid-19-dataAn ongoing repository of data on coronavirus cases and deaths in the U.S.
Prolog Other UpdatedApr 27, 2023 -
mgatk Public
Forked from caleblareau/mgatkmgatk: mitochondrial genome analysis toolkit
Python MIT License UpdatedJun 29, 2022 -
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bootcamp_stats Public
Forked from UMMS-Biocore/bootcamp_statsRStudio docker image for stats bootcamp
Dockerfile MIT License UpdatedAug 29, 2021 -
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debrowser_bioconductor_release Public
Forked from UMMS-Biocore/debrowser_bioconductor_releaseR GNU General Public License v3.0 UpdatedJul 6, 2018 -
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igv Public
Forked from igvteam/igvIntegrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Java MIT License UpdatedApr 9, 2018 -
picard Public
Forked from broadinstitute/picardA set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Java MIT License UpdatedApr 4, 2018 -
htsjdk Public
Forked from samtools/htsjdkA Java API for high-throughput sequencing data (HTS) formats.
Java UpdatedDec 3, 2017 -
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siphy Public
Forked from garber-lab/siphyPhylogenetic footprinting software for genome-wide analysis
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ESAT Public
Forked from garber-lab/ESATStripped-down version of original ESAT code
Java UpdatedSep 8, 2016 -
juicer Public
Forked from aidenlab/juicerA One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Shell MIT License UpdatedAug 22, 2016 -
scriptureV2 Public
Paired end intrinsic support
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juicebox Public
Forked from aidenlab/JuiceboxLegacySoftware for visualizing data from Hi-C and other proximity mapping experiments
Java UpdatedDec 24, 2015 -