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MMseqs2: ultra fast and sensitive search and clustering suite

C 1,663 223 Updated May 20, 2025

Official home of genome aligner based upon notion of Cactus graphs

C 576 113 Updated May 22, 2025

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

C 280 68 Updated Apr 25, 2025

MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics

C 185 23 Updated Jul 12, 2024

sensitive and precise assembly of short sequencing reads

C 155 15 Updated Oct 11, 2024

SpacePHARER CRISPR Spacer Phage-Host pAiRs findER

C 40 4 Updated May 8, 2024

MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achieving a more conservative, yet more faithful, estimation of th…

C 21 9 Updated Jun 9, 2021