Changing examples on function

.Rproj.user/02275A6F/pcs/files-pane.pper

@@ -5,5 +5,5 @@
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         }
     ],
-    "path": "~/Library/CloudStorage/OneDrive-UniversiteitUtrecht/Postdoc/ggPlantmap/ggPlantmap/data-raw"
+    "path": "~/Library/CloudStorage/OneDrive-UniversiteitUtrecht/Postdoc/ggPlantmap/ggPlantmap/data"
 }

.Rproj.user/02275A6F/pcs/source-pane.pper

@@ -1,3 +1,3 @@
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+    "activeTab": 0
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.Rproj.user/02275A6F/pcs/workbench-pane.pper

@@ -1,5 +1,5 @@
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+    "TabSet1": 3,
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     "TabZoom": {}
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.Rproj.user/02275A6F/persistent-state

@@ -1,8 +1,8 @@
 build-last-errors="[]"
 build-last-errors-base-dir="~/Library/CloudStorage/OneDrive-UniversiteitUtrecht/Postdoc/ggPlantmap/ggPlantmap/"
-build-last-outputs="[{\"type\":0,\"output\":\"==> devtools::document(roclets = c('rd', 'collate', 'namespace', 'vignette'))\\n\\n\"},{\"type\":2,\"output\":\"ℹ Updating ggPlantmap documentation\\n\"},{\"type\":2,\"output\":\"Warning: Version of roxygen2 last used with this package is 7.2.3.  You only have version 7.1.2\\nℹ Loading ggPlantmap\\n\"},{\"type\":1,\"output\":\"Writing NAMESPACE\\n\"},{\"type\":1,\"output\":\"Writing NAMESPACE\\n\"},{\"type\":1,\"output\":\"Documentation completed\\n\\n\"},{\"type\":0,\"output\":\"==> R CMD INSTALL --no-multiarch --with-keep.source ggPlantmap\\n\\n\"},{\"type\":1,\"output\":\"* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’\\n\"},{\"type\":1,\"output\":\"* installing *source* package ‘ggPlantmap’ ...\\n\"},{\"type\":1,\"output\":\"** using staged installation\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** R\\n\"},{\"type\":1,\"output\":\"** data\\n\"},{\"type\":1,\"output\":\"*** moving datasets to lazyload DB\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** byte-compile and prepare package for lazy loading\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** help\\n\"},{\"type\":1,\"output\":\"*** installing help indices\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"*** copying figures\\n\"},{\"type\":1,\"output\":\"** building package indices\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** testing if installed package can be loaded from temporary location\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** testing if installed package can be loaded from final location\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** testing if installed package keeps a record of temporary installation path\\n\"},{\"type\":1,\"output\":\"* DONE (ggPlantmap)\\n\"},{\"type\":1,\"output\":\"\"}]"
+build-last-outputs="[{\"type\":0,\"output\":\"==> devtools::document(roclets = c('rd', 'collate', 'namespace', 'vignette'))\\n\\n\"},{\"type\":2,\"output\":\"ℹ Updating ggPlantmap documentation\\n\"},{\"type\":2,\"output\":\"Warning: Version of roxygen2 last used with this package is 7.2.3.  You only have version 7.1.2\\n\"},{\"type\":2,\"output\":\"ℹ Loading ggPlantmap\\n\"},{\"type\":1,\"output\":\"Writing NAMESPACE\\n\"},{\"type\":1,\"output\":\"Writing XML.to.ggPlantmap.Rd\\nWriting ggPlantmap.merge.Rd\\nWriting ggPlantmap.heatmap.Rd\\nWriting NAMESPACE\\n\"},{\"type\":1,\"output\":\"Documentation completed\\n\\n\"},{\"type\":0,\"output\":\"==> R CMD INSTALL --no-multiarch --with-keep.source ggPlantmap\\n\\n\"},{\"type\":1,\"output\":\"* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’\\n\"},{\"type\":1,\"output\":\"* installing *source* package ‘ggPlantmap’ ...\\n\"},{\"type\":1,\"output\":\"** using staged installation\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** R\\n\"},{\"type\":1,\"output\":\"** data\\n\"},{\"type\":1,\"output\":\"*** moving datasets to lazyload DB\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** byte-compile and prepare package for lazy loading\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** help\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"*** installing help indices\\n\"},{\"type\":1,\"output\":\"*** copying figures\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** building package indices\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** testing if installed package can be loaded from temporary location\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** testing if installed package can be loaded from final location\\n\"},{\"type\":1,\"output\":\"\"},{\"type\":1,\"output\":\"** testing if installed package keeps a record of temporary installation path\\n\"},{\"type\":1,\"output\":\"* DONE (ggPlantmap)\\n\"},{\"type\":1,\"output\":\"\"}]"
 compile_pdf_state="{\"tab_visible\":false,\"running\":false,\"target_file\":\"\",\"output\":\"\",\"errors\":[]}"
 files.monitored-path=""
 find-in-files-state="{\"handle\":\"\",\"input\":\"\",\"path\":\"\",\"regex\":false,\"ignoreCase\":false,\"results\":{\"file\":[],\"line\":[],\"lineValue\":[],\"matchOn\":[],\"matchOff\":[],\"replaceMatchOn\":[],\"replaceMatchOff\":[]},\"running\":false,\"replace\":false,\"preview\":false,\"gitFlag\":false,\"replacePattern\":\"\"}"
-imageDirtyState="1"
-saveActionState="-1"
+imageDirtyState="0"
+saveActionState="0"

.Rproj.user/02275A6F/sources/prop/B14A132A

@@ -2,6 +2,6 @@
     "tempName": "Untitled1",
     "source_window_id": "",
     "Source": "Source",
-    "cursorPosition": "93,102",
-    "scrollLine": "84"
+    "cursorPosition": "103,0",
+    "scrollLine": "86"
 }

R/functions.R

@@ -69,7 +69,7 @@ ggPlantmap.plot <- function(data,layer=ROI.name,linewidth=0.5,show.legend=T) {
 #' @export
 #'
 #' @examples
-#' ggPlantmap.merge(map=ggPm.At.seed.developmentalseries,value=ggPm.seed.expression.sample,id.x="ROI.name")
+#' ggPlantmap.merge(map=ggPm.At.seed.devseries,value=ggPm.seed.expression.sample,id.x="ROI.name")
 ggPlantmap.merge <- function(map,value,id.x,id.y=id.x) {
   map %>%
     merge(value,by.x={{id.x}},by.y={{id.y}},all.x=T) %>%
@@ -90,7 +90,7 @@ ggPlantmap.merge <- function(map,value,id.x,id.y=id.x) {
 #' @export
 #'
 #' @examples
-#' quant.data <- ggPlantmap.merge(map=ggPm.At.seed.developmentalseries,value=ggPm.seed.expression.sample,id.x="ROI.name")
+#' quant.data <- ggPlantmap.merge(map=ggPm.At.seed.devseries,value=ggPm.seed.expression.sample,id.x="ROI.name")
 #' ggPlantmap.heatmap(map.quant=quant.data,value.quant=AT5G47670.expression,linewdith=1,show.legend=T)
 ggPlantmap.heatmap <- function(map.quant,value.quant=value.quant,show.legend=T,linewidth=0.5) {
   ggPlantmap <- map.quant