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38 stars written in C
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Inference Llama 2 in one file of pure C

C 17,864 2,166 Updated Aug 6, 2024

A free Windows-compatible Operating System

C 14,963 1,794 Updated Jan 17, 2025

Open Source Flight Controller Firmware

C 8,871 3,122 Updated Jan 18, 2025

Small, fast and powerful console music player for Unix-like operating systems.

C 5,646 469 Updated Jan 11, 2025

Unlock vGPU functionality for consumer grade GPUs.

C 4,674 432 Updated Feb 28, 2023

INAV: Navigation-enabled flight control software

C 3,305 1,510 Updated Jan 17, 2025

Clean-code version of the baseflight flight controller firmware

C 2,618 1,388 Updated Oct 20, 2023

RNA-seq aligner

C 1,897 514 Updated Jun 28, 2024

Library for the analysis of networks

C 1,785 408 Updated Jan 17, 2025

EdgeTX is the cutting edge open source firmware for your R/C radio

C 1,681 351 Updated Jan 18, 2025

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

C 1,559 554 Updated Jul 27, 2024

Removed according to regulations.

C 1,469 1,053 Updated Jul 23, 2020

TCR and BCR assembly from RNA-seq data

C 291 51 Updated Jan 3, 2025

a python package for fast random access to sequences from plain and gzipped FASTA/Q files

C 272 23 Updated Dec 26, 2024

Next Generation Flight Controller Firmware

C 231 44 Updated Feb 16, 2021

Windowed Adaptive Trimming for fastq files using quality

C 218 95 Updated May 8, 2017

Inference Llama models in one file of pure C for Windows 98 running on 25-year-old hardware

C 210 24 Updated Dec 28, 2024

A (mostly) universal methylation extractor for BS-seq experiments.

C 168 43 Updated Jun 21, 2024

WFA-lib: Wavefront alignment algorithm library v2

C 164 38 Updated Jan 16, 2025

Native SSH client in R based on libssh

C 129 20 Updated Sep 19, 2024

[IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long reads

C 126 9 Updated Sep 10, 2018

Adaptive semi-global banded alignment on string graphs

C 65 5 Updated May 4, 2018

T1K is a versatile methods to genotype highly polymorphic genes (e.g. KIR, HLA) with bulk or single-cell RNA-seq, WGS or WES data.

C 59 8 Updated Jan 8, 2025

A Tool for Embedding Strings in Vector Spaces

C 58 18 Updated May 8, 2019

IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:

C 51 24 Updated Apr 29, 2022

Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for amplicons

C 50 13 Updated Feb 7, 2018

V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data

C 29 5 Updated Aug 9, 2022

ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.

C 28 14 Updated Oct 11, 2019
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