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Github repo for AIRR Data Commons registry specification

2 Updated Aug 12, 2024

T-cell receptor sequence embedding via prototypes

Jupyter Notebook 1 Updated Jan 15, 2025

Hackathon event in St Petersburg, our team takes first place.

Jupyter Notebook 1 Updated Jan 3, 2025

A Jupyter Server Extension Providing Support for Y Documents

Jupyter Notebook 188 32 Updated Jan 9, 2025

Protein language model customized for antibodies

Jupyter Notebook 117 10 Updated Dec 31, 2024
Python 4 Updated Jun 26, 2024

Fast EMD for Python: a wrapper for Pele and Werman's C++ implementation of the Earth Mover's Distance metric

C++ 484 62 Updated Feb 27, 2023

Wasserstein / earth mover's distance visualizations

Jupyter Notebook 66 26 Updated Feb 24, 2017

MoverScore: Text Generation Evaluating with Contextualized Embeddings and Earth Mover Distance

Python 200 35 Updated Nov 20, 2023

PyTorch Wrapper for Earth-Mover-Distance (EMD) for 3D point cloud regression

Cuda 290 56 Updated Apr 18, 2023

A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression

HTML 170 46 Updated Nov 18, 2024

Run your own AI cluster at home with everyday devices 📱💻 🖥️⌚

Python 18,701 1,048 Updated Jan 13, 2025

Inference Llama models in one file of pure C for Windows 98 running on 25-year-old hardware

C 210 24 Updated Dec 28, 2024

Inference Llama 2 in one file of pure C

C 17,863 2,166 Updated Aug 6, 2024

The most advanced ad blocker for iOS

JavaScript 1,475 206 Updated Dec 30, 2024

AdGuard browser extension

TypeScript 3,223 345 Updated Jan 17, 2025

GTE: A Graph Learning Framework for Prediction of T-cell Receptors and Epitopes Binding Specificity

Python 2 Updated Aug 2, 2024

Integrative analysis for scTCR- and scRNA-seq data

Python 14 3 Updated Dec 10, 2024

ThunderSVM: A Fast SVM Library on GPUs and CPUs

C++ 1,578 218 Updated Apr 1, 2024

Python interface to amino acid properties and IEDB

Python 55 17 Updated Oct 7, 2024

𝒫robabilistic modeling of RNA velocity ⬱

Python 46 5 Updated Jan 17, 2025
Python 27 4 Updated Jan 10, 2025

gghic

R 5 Updated Jan 15, 2025

CLDF: Cross-Linguistic Data Formats - the specification

Python 56 17 Updated Apr 15, 2024

Code for negative binomial mixture model described in Wasdin et al.

Jupyter Notebook 1 Updated Nov 22, 2024
R 4 1 Updated Dec 16, 2024
Jupyter Notebook 7 4 Updated Jun 27, 2024

Scoring alignments by embedding vector similarity

Jupyter Notebook 6 Updated Oct 31, 2023

Shiny app to easily create publishable plots for scientific papers

R 26 7 Updated Nov 29, 2024

An advanced immunoglobulin sequence simulation suite for benchmarking alignment models and sequence analysis.

Python 3 1 Updated Dec 7, 2024
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