fix issues in notebooks

miniufo · Jul 20, 2023 · e6ac46f · e6ac46f
1 parent af5b893
commit e6ac46f
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Showing 9 changed files with 74 additions and 558 deletions.
diff --git a/Data/MassCircQ.nc b/Data/MassCircQ.nc
diff --git a/docs/environment.yml b/docs/environment.yml
@@ -12,3 +12,4 @@ dependencies:
   - numba
   - proplot
   - cartopy
+  - pooch
diff --git a/docs/source/notebooks/.ipynb_checkpoints/04_Eliassen_model-checkpoint.ipynb b/docs/source/notebooks/.ipynb_checkpoints/04_Eliassen_model-checkpoint.ipynb
@@ -191,7 +191,7 @@
     "import numpy as np\n",
     "\n",
     "# load dataset\n",
-    "ds = xr.open_dataset('../../../Data/Zonalmean.nc')\n",
+    "ds = xr.open_dataset('../../../Data/ZonalMean.nc')\n",
     "print(ds)\n",
     "\n",
     "cosLat = np.cos(np.deg2rad(ds.lat))\n",
@@ -216,7 +216,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 2,
    "metadata": {},
    "outputs": [
     {
@@ -272,7 +272,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [
     {
@@ -304,7 +304,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 16,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -357,7 +357,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 20,
+   "execution_count": 5,
    "metadata": {},
    "outputs": [
     {
@@ -430,7 +430,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 21,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [
     {
@@ -488,7 +488,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 22,
+   "execution_count": 7,
    "metadata": {},
    "outputs": [
     {
@@ -526,7 +526,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 23,
+   "execution_count": 8,
    "metadata": {},
    "outputs": [
     {

diff --git a/docs/source/notebooks/.ipynb_checkpoints/11_Omega_equation-checkpoint.ipynb b/docs/source/notebooks/.ipynb_checkpoints/11_Omega_equation-checkpoint.ipynb
diff --git a/docs/source/notebooks/04_Eliassen_model.ipynb b/docs/source/notebooks/04_Eliassen_model.ipynb
@@ -191,7 +191,7 @@
     "import numpy as np\n",
     "\n",
     "# load dataset\n",
-    "ds = xr.open_dataset('../../../Data/Zonalmean.nc')\n",
+    "ds = xr.open_dataset('../../../Data/ZonalMean.nc')\n",
     "print(ds)\n",
     "\n",
     "cosLat = np.cos(np.deg2rad(ds.lat))\n",
@@ -216,7 +216,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 2,
    "metadata": {},
    "outputs": [
     {
@@ -272,7 +272,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [
     {
@@ -304,7 +304,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 16,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -357,7 +357,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 20,
+   "execution_count": 5,
    "metadata": {},
    "outputs": [
     {
@@ -430,7 +430,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 21,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [
     {
@@ -488,7 +488,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 22,
+   "execution_count": 7,
    "metadata": {},
    "outputs": [
     {
@@ -526,7 +526,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 23,
+   "execution_count": 8,
    "metadata": {},
    "outputs": [
     {

diff --git a/docs/source/notebooks/05_reference_SWM.ipynb b/docs/source/notebooks/05_reference_SWM.ipynb
@@ -196,7 +196,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [
     {
@@ -241,9 +241,9 @@
     "    \n",
     "except ImportError:\n",
     "    print('load from a pre-calculated nc file')\n",
-    "    ds_ctr = xr.open_dataset('../../../Data/MassCircQ.nc')\n",
+    "    ds_ctr = xr.open_dataset('../../../Data/contour.nc')\n",
     "    \n",
-    "    ctr = ds_ctr.ctr\n",
+    "    ctr = ds_ctr.PV\n",
     "    Mass = ds_ctr.Mass\n",
     "    Circ = ds_ctr.Circ\n",
     "\n",
@@ -273,7 +273,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -319,7 +319,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 4,
+   "execution_count": 5,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -340,7 +340,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [
     {
@@ -407,7 +407,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 10,
+   "execution_count": 7,
    "metadata": {},
    "outputs": [
     {

diff --git a/docs/source/notebooks/11_Omega_equation.ipynb b/docs/source/notebooks/11_Omega_equation.ipynb
diff --git a/docs/source/notebooks/test01_Stommel_Arons_model.ipynb b/docs/source/notebooks/test01_Stommel_Arons_model.ipynb
diff --git a/docs/source/notebooks/test04_3D_Ocean_flow.ipynb b/docs/source/notebooks/test04_3D_Ocean_flow.ipynb
-Original file line number
+Diff line change
@@ Expand Up / @@ -12,3 +12,4 @@ dependencies: @@
       - numba
       - proplot
       - cartopy
+      - pooch