update site v1.2

mjz1 · Jul 9, 2024 · 2fc8bcf · 2fc8bcf
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diff --git a/docs/404.html b/docs/404.html
diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
diff --git a/docs/LICENSE.html b/docs/LICENSE.html
diff --git a/docs/articles/TCGA.html b/docs/articles/TCGA.html
diff --git a/docs/articles/index.html b/docs/articles/index.html
diff --git a/docs/articles/scatools.html b/docs/articles/scatools.html
diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/news/index.html b/docs/news/index.html
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
@@ -4,7 +4,7 @@ pkgdown_sha: ~
 articles:
   scatools: scatools.html
   TCGA: TCGA.html
-last_built: 2024-07-09T21:58Z
+last_built: 2024-07-09T22:04Z
 urls:
   reference: https://mjz1.github.io/scatools/reference
   article: https://mjz1.github.io/scatools/articles
diff --git a/docs/reference/EM2.html b/docs/reference/EM2.html
diff --git a/docs/reference/add_gc_cor.html b/docs/reference/add_gc_cor.html
diff --git a/docs/reference/add_gc_freq.html b/docs/reference/add_gc_freq.html
diff --git a/docs/reference/add_hmmcopy.html b/docs/reference/add_hmmcopy.html
diff --git a/docs/reference/bin_atac_frags.html b/docs/reference/bin_atac_frags.html
diff --git a/docs/reference/bin_frags_chr.html b/docs/reference/bin_frags_chr.html
diff --git a/docs/reference/bin_snp_data.html b/docs/reference/bin_snp_data.html
diff --git a/docs/reference/bin_snp_data2.html b/docs/reference/bin_snp_data2.html
diff --git a/docs/reference/bind_sublist.html b/docs/reference/bind_sublist.html
diff --git a/docs/reference/bins_10mb.html b/docs/reference/bins_10mb.html
diff --git a/docs/reference/calc_ai.html b/docs/reference/calc_ai.html
diff --git a/docs/reference/calc_allelic.html b/docs/reference/calc_allelic.html
diff --git a/docs/reference/calc_clonal_diversity.html b/docs/reference/calc_clonal_diversity.html
diff --git a/docs/reference/calc_cnv_score.html b/docs/reference/calc_cnv_score.html
diff --git a/docs/reference/calc_snn_specificity.html b/docs/reference/calc_snn_specificity.html
diff --git a/docs/reference/cluster_seurat.html b/docs/reference/cluster_seurat.html
diff --git a/docs/reference/cnaHeatmap.html b/docs/reference/cnaHeatmap.html
diff --git a/docs/reference/correct_atac_bias.html b/docs/reference/correct_atac_bias.html
diff --git a/docs/reference/disjoint_bins_map.html b/docs/reference/disjoint_bins_map.html
diff --git a/docs/reference/do_qc.html b/docs/reference/do_qc.html
diff --git a/docs/reference/filter_sce.html b/docs/reference/filter_sce.html
diff --git a/docs/reference/gc_cor_modal.html b/docs/reference/gc_cor_modal.html
diff --git a/docs/reference/gc_modal_qc_filter.html b/docs/reference/gc_modal_qc_filter.html
diff --git a/docs/reference/get_assay_dat.html b/docs/reference/get_assay_dat.html
diff --git a/docs/reference/get_blacklist.html b/docs/reference/get_blacklist.html
diff --git a/docs/reference/get_chr_arm_bins.html b/docs/reference/get_chr_arm_bins.html