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@mpinb

Max Planck Institute for Neurobiology of Behavior - caesar

README.md

Welcome to the MPINB GitHub page

For employee access, please refer to the corresponding intranet page.

Popular repositories Loading

  1. msemalign msemalign Public

    serial section multibeam scanning electron microscopy volume alignment

    Python 5 1

  2. swarm-scripts swarm-scripts Public

    scripts for a basic method of scaling on a SLURM HPC cluster

    Python 1

  3. ffn ffn Public

    Forked from google/ffn

    Flood-Filling Networks for instance segmentation in 3d volumes.

    Python

  4. rcc-xcorr rcc-xcorr Public

    A Python library to compute normalized 2D cross-correlation of images using GPU and multiprocessing.

    Jupyter Notebook

  5. Multiview Multiview Public

    Forked from PaulStahr/Multiview

    A program which calculates different optical measures in Opengl.

    C++

  6. gunpowder gunpowder Public

    Forked from funkelab/gunpowder

    A library to facilitate machine learning on multi-dimensional images.

    Python 1

Repositories

Showing 10 of 40 repositories
  • multi_gpu_training Public Forked from PrincetonUniversity/multi_gpu_training

    jupyter notebooks discussing multi GPU training and performance profiling

    Python 0 MIT 47 0 0 Updated Mar 6, 2025
  • braid-opto-arena Public
    Jupyter Notebook 0 0 0 0 Updated Feb 27, 2025
  • Kaleido Public Forked from plotly/Kaleido

    Fast static image export for web-based visualization libraries with zero dependencies

    HTML 0 MIT 44 0 0 Updated Feb 21, 2025
  • alphafold Public Forked from google-deepmind/alphafold

    Open source code for AlphaFold 2.

    Python 0 Apache-2.0 2,369 0 0 Updated Jan 29, 2025
  • msemalign Public

    serial section multibeam scanning electron microscopy volume alignment

    Python 5 GPL-3.0 1 0 0 Updated Dec 3, 2024
  • submitit Public Forked from erjel/submitit

    Python 3.8+ toolbox for submitting jobs to Slurm

    Python 0 MIT 132 0 0 Updated Nov 8, 2024
  • Augmentor Public Forked from seung-lab/Augmentor

    Data augmentation for training 3D convolutional nets

    Jupyter Notebook 0 GPL-3.0 7 0 0 Updated Oct 25, 2024
  • swipe-labeler Public Forked from spaceml-org/Swipe-Labeler

    Swipe Labeler is a Graphical User Interface based tool that allows rapid labeling of image data.

    Jupyter Notebook 0 6 0 0 Updated Oct 23, 2024
  • waterz Public Forked from funkey/waterz

    Simple watershed and agglomeration library for affinity graphs.

    C++ 0 21 0 0 Updated Oct 9, 2024
  • sparseANNs Public
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 30, 2024
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