Remove unused parameters to AssemblyGraph().

natir · Nov 17, 2016 · f71858d · f71858d
1 parent 6f03602
commit f71858d
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Showing 3 changed files with 1 addition and 9 deletions.
diff --git a/src/bogart/AS_BAT_AssemblyGraph.C b/src/bogart/AS_BAT_AssemblyGraph.C
@@ -80,8 +80,6 @@ AssemblyGraph::buildReverseEdges(void) {
 
 void
 AssemblyGraph::buildGraph(const char   *UNUSED(prefix),
-                          double        UNUSED(deviationGraph),
-                          double        UNUSED(deviationBubble),
                           double        deviationRepeat,
                           TigVector    &tigs) {
   uint32  fiLimit    = RI->numReads();

diff --git a/src/bogart/AS_BAT_AssemblyGraph.H b/src/bogart/AS_BAT_AssemblyGraph.H
@@ -94,11 +94,9 @@ public:
 class AssemblyGraph {
 public:
   AssemblyGraph(const char   *prefix,
-                double        deviationGraph,
-                double        deviationBubble,
                 double        deviationRepeat,
                 TigVector    &tigs) {
-    buildGraph(prefix, deviationGraph, deviationBubble, deviationRepeat, tigs);
+    buildGraph(prefix, deviationRepeat, tigs);
   }
 
   ~AssemblyGraph() {
@@ -115,8 +113,6 @@ public:
 public:
   void                      buildReverseEdges(void);
   void                      buildGraph(const char   *prefix,
-                                       double        deviationGraph,
-                                       double        deviationBubble,
                                        double        deviationRepeat,
                                        TigVector    &tigs);
 

diff --git a/src/bogart/bogart.C b/src/bogart/bogart.C
@@ -411,8 +411,6 @@ main (int argc, char * argv []) {
   contigs.reportErrorProfiles(prefix, "assemblyGraph");
 
   AssemblyGraph *AG = new AssemblyGraph(prefix,
-                                        deviationGraph,
-                                        deviationBubble,
                                         deviationRepeat,
                                         contigs);