2 Pull requests merged by 2 people

• Configure the default module repository, branch, and path from environment variables.

  #3481 merged Mar 6, 2025

• Fix pipeline linting nf-core component behaviour

  #3480 merged Mar 6, 2025

2 Pull requests opened by 2 people

• Template: Run awsfulltest after release, and with dev revision on PRs to master

  #3485 opened Mar 7, 2025

• Fix multiple workflow in subworkflow

  #3486 opened Mar 7, 2025

2 Issues closed by 2 people

• allow other input file formats in pipeline template

  #3482 closed Mar 10, 2025

• Lint modules and sbwf with `nf-core pipelines lint` by default

  #3478 closed Mar 6, 2025

3 Issues opened by 3 people

• Add subcommand for searching nf-core test-datasets

  #3487 opened Mar 11, 2025

• Error linting module that has the keyword `val` in its emit name

  #3483 opened Mar 6, 2025

• Check for import in all workflows

  #3479 opened Mar 5, 2025

25 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• `bump_version`: don't require pipeline version in nf-test snapshots

  #3477 commented on Mar 11, 2025 • 9 new comments

• feat: Install subworkflows with modules from different remotes

  #3083 commented on Mar 10, 2025 • 5 new comments

• chore(deps): update dependency textual to v2

  #3471 commented on Mar 11, 2025 • 0 new comments

• template - basic pipeline level nf-test tests

  #3469 commented on Mar 11, 2025 • 0 new comments

• Document ext.args in meta yml

  #3451 commented on Mar 4, 2025 • 0 new comments

• Update dependency prompt_toolkit to <=3.0.50

  #3412 commented on Mar 6, 2025 • 0 new comments

• Remove args stub from module template to satisfy language server

  #3403 commented on Mar 11, 2025 • 0 new comments

• Update dependency textual-dev to v1.7.0

  #3378 commented on Mar 6, 2025 • 0 new comments

• Template: Add `gpu` profile

  #3272 commented on Mar 11, 2025 • 0 new comments

• 3262 Fix pipeline lint bug for pipelines with minimal template features

  #3265 commented on Mar 11, 2025 • 0 new comments

• Create pre-commit hooks

  #3141 commented on Mar 11, 2025 • 0 new comments

• Adopt pyproject.toml

  #3139 commented on Mar 11, 2025 • 0 new comments

• Plugin to view `.nextflow.log` files using `toolong`

  #2895 commented on Mar 11, 2025 • 0 new comments

• Modules: Have component_files_identical check for new optional files in modules

  #2816 commented on Mar 11, 2025 • 0 new comments

• Add config contacts

  #2800 commented on Mar 11, 2025 • 0 new comments

• Add a multi-cloud test profile

  #2544 commented on Mar 11, 2025 • 0 new comments

• Add nf-prov

  #2455 commented on Mar 11, 2025 • 0 new comments

• nf-core modules list works on pipeline repos as well as module repos

  #2418 commented on Mar 11, 2025 • 0 new comments

• Use more pytest fixtures in modules tests

  #2226 commented on Mar 11, 2025 • 0 new comments

• [create] Option to set branch names

  #1961 commented on Mar 11, 2025 • 0 new comments

• WIP: MultiQC table of all parameters

  #1389 commented on Mar 11, 2025 • 0 new comments

• Institutional configs are not included when `NXF_OFFLINE` is on

  #3430 commented on Mar 11, 2025 • 0 new comments

• Renovate Dashboard 🤖

  #2596 commented on Mar 11, 2025 • 0 new comments

• RO-crate content appear in the nf-core lint warning if there is a TODO

  #3387 commented on Mar 10, 2025 • 0 new comments

• AWS full tests

  #3462 commented on Mar 6, 2025 • 0 new comments