code for deep learning courses

Multi-sample change detection in Hi-C patterns

Genomic Association Tester

Polyidus provides a framework to catch chimeric DNA sequences with a tale of python

ATAC-seq snakemake pipeline

Detect chromatin loops (and other patterns) in Hi-C contact maps

Simple library/pipeline to generate and handle simple Hi-C data

HiC for copy Number variation and Translocation detection

Standard Parker Lab ATAC-seq processing pipeline in Snakemake form

Deep Learning for humans