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A good, simple outliner for macOS, iPadOS, and iOS.

Swift 350 24 Updated Jan 19, 2025
Python 15 2 Updated Aug 10, 2024

Merlion: A Machine Learning Framework for Time Series Intelligence

Python 3,508 309 Updated Jun 20, 2024

Tool for producing high quality forecasts for time series data that has multiple seasonality with linear or non-linear growth.

Python 18,748 4,553 Updated Oct 28, 2024

Kats, a kit to analyze time series data, a lightweight, easy-to-use, generalizable, and extendable framework to perform time series analysis, from understanding the key statistics and characteristi…

Python 5,559 567 Updated Dec 21, 2024

A place for the development version of the changepoint package on CRAN.

R 129 35 Updated Dec 3, 2024

fast implementation of singular spectrum transformation (change point detection algorithm)

Jupyter Notebook 51 15 Updated May 20, 2018

R package for Singular Spectrum Analysis

R 57 27 Updated Sep 4, 2024

p5 is a Python package based on the core ideas of Processing.

Python 740 120 Updated Apr 28, 2024

Official repository for the Boltz-1 biomolecular interaction model

Python 1,533 193 Updated Jan 17, 2025
Jupyter Notebook 70 11 Updated Aug 23, 2024

Algorithms for various Network Layouts and Tooling for planning FE Calculations

Jupyter Notebook 15 4 Updated Jan 15, 2025

This pipeline is executing a RE-EDS run for relative free energy calculations. It can be used for example for calculation of hydration free energies or ligand binding free energies.

Python 30 9 Updated Feb 18, 2024

Boltzmann Generators and Normalizing Flows in PyTorch

Jupyter Notebook 155 38 Updated Jan 30, 2024

This is a SnakeMake based workflow for ABFE calculations that can be easily scaled in a high-throughput manner via Slurm for example.

Python 45 17 Updated Nov 3, 2024

This package contains tools for setting up hybrid-topology FE calculations

Python 25 3 Updated Jan 10, 2025

The Open Free Energy toolkit

Python 151 22 Updated Jan 17, 2025

Scripts to perform alchemical ABFE in OpenMM

Jupyter Notebook 4 1 Updated Nov 20, 2024

Automated Adaptive Absolute alchemical Free Energy calculator

Python 79 9 Updated Jan 8, 2025

OpenMM-based framework for absolute and relative binding free energy calculations with the Alchemical Transfer Method

Python 126 30 Updated Dec 6, 2024

OpenMM Metal Plugin

C 13 2 Updated Aug 20, 2024

R Package for Calculating Healthy Eating Index-2020 (HEI2020), Alternative Healthy Eating Index (AHEI), Dietary Approaches to Stop Hypertension (DASH), Mediterranean Diet (MED), Dietary Inflammatio…

R 110 17 Updated Nov 14, 2024
Python 100 13 Updated Aug 8, 2024

the simple alchemistry library

Python 203 51 Updated Dec 18, 2024

Fusion models for Atomic and molecular STructures (FAST)

Python 90 30 Updated Jul 11, 2023

Safari web extension for DeepL translate.

CSS 146 5 Updated Dec 20, 2024

Neural relational inference for interacting systems - pytorch

Python 750 156 Updated Nov 19, 2019

Neural relational inference for molecular dynamics simulations

Python 55 23 Updated May 30, 2023
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