DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.

Documentation for users and developers working with or contributing to Pipeliner.

Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.

Documentation for the ISB-CGC on Read the Docs.

ISB CGC Webapp

Tools for next-generation sequencing in use at the CCR/NCI