pakiessling
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COSG Public
Forked from genecell/COSGAccurate and fast cell marker gene identification with COSG
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJan 6, 2025 -
ArkhamHorror Public
Forked from halogenandtoast/ArkhamHorrorAn unofficial rules-compliant browser based version of Arkham Horror: The Card Game. Not produced, endorsed, or supported by, or affiliated with Fantasy Flight Games.
Haskell UpdatedJan 2, 2025 -
spatial_compare Public
Forked from AllenInstitute/spatial_comparepackage for comparing spatial transcriptomics datasets
Jupyter Notebook Other UpdatedDec 20, 2024 -
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mousipy Public
Forked from stefanpeidli/mousipyTranslates an AnnData object with mouse gene symbols into one with human gene symbols by mapping orthologs from biomart.
Jupyter Notebook MIT License UpdatedOct 23, 2024 -
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Deep-Live-Cam Public
Forked from hacksider/Deep-Live-Camreal time face swap and one-click video deepfake with only a single image (uncensored)
Python GNU Affero General Public License v3.0 UpdatedAug 12, 2024 -
sopa Public
Forked from gustaveroussy/sopaTechnology-invariant pipeline for spatial omics analysis (Xenium / MERSCOPE / CosMx / PhenoCycler / MACSima / Hyperion) that scales to millions of cells
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 24, 2024 -
vpt-plugin-cellpose Public
Forked from Vizgen/vpt-plugin-cellposeCellpose plugin for the Vizgen Post-processing Tool
Python Apache License 2.0 UpdatedJun 25, 2024 -
pertpy Public
Forked from scverse/pertpyPerturbation Analysis in the scverse ecosystem.
Python MIT License UpdatedJun 1, 2024 -
merfish-utils Public
Some example scripts for handling data generated by Vizgen Merscope
Batchfile MIT License UpdatedApr 2, 2024 -
nichecompass Public
Forked from Lotfollahi-lab/nichecompassEnd-to-end analysis of spatial multi-omics data
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 24, 2024 -
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multi-condition-comparisions Public
Forked from scverse/multi-condition-comparisionsFunctions for analyzing and visualizing multi-condition single-cell data (prototypes created at Cambridge hackathon)
Python BSD 3-Clause "New" or "Revised" License UpdatedDec 2, 2023 -
CellSPA Public
Forked from SydneyBioX/CellSPACell Segmentation Performance Assessment
R UpdatedNov 5, 2023 -
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single-cell-best-practices Public
Forked from theislab/single-cell-best-practiceshttps://www.sc-best-practices.org
Jupyter Notebook Other UpdatedOct 16, 2023 -
squidpy_notebooks Public
Forked from scverse/squidpy_notebooksTutorials for Squidpy
Jupyter Notebook MIT License UpdatedAug 24, 2023 -
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template Public
Template for my bioinformatics projects
Jupyter Notebook MIT License UpdatedMay 17, 2023