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paq88/README.md

Hello,

I'm Marek (Paq88), a Master's student in Bioinformatics at Wroclaw University of Environmental and Life Sciences in Poland. My work primarily focuses on genome assembly and variant calling pipelines, utilizing Nanopore and Illumina reads. I have experience in building and testing variant calling pipelines using Nextflow. Additionally, I am good in programming languages such as Python, R, and Bash. Recently, Im developing a special interest in Neural Networks and have constructed an NN Classifier based on fish microbiome data.

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  1. Variant_Calling_Nextflow_pipeline Variant_Calling_Nextflow_pipeline Public

    Pipeline for SNP Calling Created in Nextflow management system for purposesof testing the advantages of managed systems vs native applications in variant calling. The paper created and published on…

    Nextflow 1

  2. Rosalind Rosalind Public

    My solutions to rosalind tasks

    Jupyter Notebook

  3. Python-data-analysys Python-data-analysys Public

    Its my personal depository with projects mostly from dataquest that i did and in my opinion upgraded a bit in my python data scientist learning path.

    Jupyter Notebook

  4. Medical_database Medical_database Public

    Early Project of medical database in django

    Python