Adding dockerfiles/scripts

.gitignore

@@ -80,4 +80,4 @@ Mercurial
 .hg*
 
 # Ignore build folder
-build
+./build/

docker/build/Dockerfile

@@ -0,0 +1,22 @@
+FROM ubuntu:latest
+ENV LANG C.UTF-8
+RUN apt-get update && apt-get install -y \
+    python3 \
+    pkg-config \
+    python3-pip \
+    git \
+    build-essential \
+    python3-numpy \
+    python3-scipy \
+    python3-mpi4py \
+    swig \
+    libopenmpi-dev \
+    openmpi-bin \
+ && rm -rf /var/lib/apt/lists/* \
+ && update-alternatives --install /usr/bin/python python /usr/bin/python3 10
+
+# Copies your code file from your action repository to the filesystem path `/` of the container
+COPY compileSU2.sh /compileSU2.sh
+
+# Code file to execute when the docker container starts up (`entrypoint.sh`)
+ENTRYPOINT ["/compileSU2.sh"]

docker/build/compileSU2.sh

@@ -0,0 +1,67 @@
+#!/bin/sh -l
+
+echo "SU2 v7 Docker Compilation Container"
+usage="$(basename "$0") [-h] [-f build_flags] [-b branch_name] 
+where:
+    -h  show this help text
+    -f  meson build flags (ignored if a directory \"docker_build\" is found at /src/SU2).
+    -b  branch name (if not given, existing SU2 directory must be mounted in /src/SU2).
+
+Compiled binaries can be found at /install/. Mount that directory for access.
+Note: If you specify a working directory using the --workdir option for docker, 
+      append this directory to all paths above (e.g. use --workdir=/tmp if running in user mode)."
+
+flags=""
+branch=""
+workdir=$PWD
+if [ "$#" -ne 0 ]; then
+    while [ "`echo $1 | cut -c1`" = "-" ]
+    do
+        case "$1" in
+            -f)
+                    flags=$2
+                    shift 2
+                ;;  
+            -b)
+                    branch=$2
+                    shift 2
+                ;;
+            *)
+                    echo "$usage" >&2
+                    exit 1
+                ;;
+    esac
+    done
+fi
+
+if [ ! -z "$branch" ]; then
+  name="SU2_$(echo $branch | sed 's/\//_/g')"
+  echo "Branch provided. Cloning to $PWD/src/$name"
+  if [ ! -d "src" ]; then
+    mkdir "src"
+  fi
+  cd "src"
+  git clone --recursive https://github.com/su2code/SU2 $name
+  cd $name
+  git config --add remote.origin.fetch '+refs/pull/*/merge:refs/remotes/origin/refs/pull/*/merge'
+  git fetch origin
+  git checkout $branch
+  git submodule update
+else
+  if [ ! -d "src/SU2" ]; then
+    echo "SU2 source directory not found. Make sure to mount existing SU2 at directory at /src/SU2. Otherwise use -b to provide a branch."
+    exit 1
+  fi
+  cd src/SU2
+fi
+
+if [ ! -d "docker_build" ]; then
+  ./meson.py docker_build --prefix=$workdir/install $flags
+else
+  echo "Build Directory found. Ignoring build flags. To set new flags, remove docker_build directory."
+  ./meson.py docker_build --reconfigure $flags
+fi
+
+./ninja -C docker_build install
+
+

docker/test/Dockerfile

@@ -0,0 +1,7 @@
+FROM su2code/build-su2:latest
+
+# Copies your code file from your action repository to the filesystem path `/` of the container
+COPY runTests.sh /runTests.sh
+
+# Code file to execute when the docker container starts up (`entrypoint.sh`)
+ENTRYPOINT ["/runTests.sh"]

docker/test/runTests.sh

@@ -0,0 +1,124 @@
+#!/bin/sh -l
+# List of arguments to this script
+# $1 : Tag/SHA of su2code/SU2
+# $2 : Tag/SHA of su2code/TestCases
+# $3 : Tag/SHA of su2code/Tutorials
+# $4 : Path of the installation directory
+# $5 : Test script to execute
+
+usage="$(basename "$0") [-h] [-t tutorial_branch] [-b su2_branch] [-c testcases_branch] [-s test_script] 
+where:
+    -h  show this help text
+    -t  branch of su2code/su2code.github.io repo 
+    (if not provided, it is assumed that it is mounted at /src/SU2)
+    -b  branch of su2code/SU2 repo.
+    (if not provided, it is assumed that it is mounted at /src/Tutorials)
+    -c  branch of su2code/TestCases repo.
+    (if not provided, it is assumed that it is mounted at /src/TestData)
+    -s  name of the test script to execute (default: parallel_regression.py).
+
+Compiled binaries must be mounted at /install/ !
+
+Note: If you specify a working directory using the --workdir option for docker, 
+      append this directory to all paths above (e.g. use --workdir=/tmp if running in user mode)."
+
+su2branch=""
+testbranch=""
+tutorialbranch=""
+script="parallel_regression.py"
+
+while [ "`echo $1 | cut -c1`" = "-" ]
+do
+    case "$1" in
+        -t)
+                tutorialbranch=$2
+                shift 2
+            ;;
+        -b)
+                su2branch=$2
+                shift 2
+            ;;
+        -c)
+                testbranch=$2
+                shift 2
+            ;;
+        -s)
+                script=$2
+                shift 2
+            ;;
+        *)
+                echo "$usage" >&2
+                exit 1
+            ;;
+esac
+done
+
+
+if [ ! -d "tests" ]; then
+  mkdir tests
+fi
+if [ ! -d "src" ]; then
+  mkdir "src"
+fi
+
+if [ ! -z "$su2branch" ]; then
+  name="SU2_$(echo $su2branch | sed 's/\//_/g')"
+  echo "Branch provided. Cloning to $PWD/src/$name"
+  cd "src"
+
+  # Clone su2code/SU2, su2code/TestCases and su2code/Tutorials
+  git clone -b master https://github.com/su2code/SU2 $name
+  cd $name
+  git config --add remote.origin.fetch '+refs/pull/*/merge:refs/remotes/origin/refs/pull/*/merge'
+  git fetch origin
+  git checkout $su2branch
+  git submodule update
+  cd ..
+  cd ..
+  cp -r src/$name/TestCases tests/.
+else
+  if [ ! -d "src/SU2" ]; then
+    echo "SU2 source directory not found. Make sure to mount existing SU2 at directory at /src/SU2. Otherwise use -b to provide a branch."
+    exit 1
+  fi
+  cp -r src/SU2/TestCases tests/.
+fi
+if [ ! -z "$testbranch" ]; then
+  git clone --depth=1 -b $testbranch https://github.com/su2code/TestCases.git ./TestData
+else
+  if [ ! -d "src/TestData" ]; then
+    echo "$PWD/src/TestData not found. Make sure to mount existing su2code/TestCases repo or use -c to provide a branch to clone."
+    exit 1
+  fi
+fi
+cp -R ./TestData/* tests/TestCases/
+if [ ! -z "$tutorialbranch" ]; then
+  git clone --depth=1 -b $tutorialbranch https://github.com/su2code/su2code.github.io ./Tutorials
+else
+  if [ ! -d "src/Tutorials" ]; then
+    echo "$PWD/src/Tutorials not found. Make sure to mount existing su2code/su2code.github.io repo or use -t to provide a branch to clone."
+    exit 1
+  fi
+fi
+cp -R ./Tutorials/ tests/.
+
+# Set the environment variables
+export SU2_RUN=$PWD/install/bin
+export PATH=$SU2_RUN:$PATH
+export PYTHONPATH=$SU2_RUN:$PYTHONPATH
+export OMPI_MCA_btl_vader_single_copy_mechanism=none
+export SU2_MPI_COMMAND='mpirun --allow-run-as-root -n %i %s'
+alias mpirun='mpirun --allow-run-as-root'
+
+# Run Test Script
+cd tests/TestCases
+python $script
+
+if [ $? -eq 0 ]; then
+    echo "Tests passed"
+    exit 0
+else
+    echo "Tests failed"
+    exit 1
+fi
+